| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is resE [H]
Identifier: 188585612
GI number: 188585612
Start: 1048303
End: 1050096
Strand: Direct
Name: resE [H]
Synonym: Nther_0985
Alternate gene names: 188585612
Gene position: 1048303-1050096 (Clockwise)
Preceding gene: 188585611
Following gene: 188585616
Centisome position: 33.12
GC content: 32.61
Gene sequence:
>1794_bases ATGAGAACAATTAAAAGTAAAATTAATACAGCTTTTTCCATATTAATTGCCCTTGCTTTCATAAGCATGGGATTATATTT ATTTAATTATTTTTCAAATTTTTATTTAGAAAATTTGGAAGATCAGCTAGTTAATAAAGCAAAAATGATATCACACAGCA TTAAAGATAGTGAACTCGCAGGCGATGCATTGCAAGAATACGTTGTCACTTTAGGCACAGATACTGGTTTTAGATTTACA GTAGTCAATAATGATGGAACTGTCCTTGCCGAGTCTGAAAAGAATCCGGAAGTAATGGATAATCATCTAGATCGTCCGGA AATAAAAAAAGCTTATGAAGAAGGAACAGGTCTTCATACCAGATATTCAAATACAATTGACGAAGATTTGCTATACGCTG CAGTCCCTATTTACAATGAGGAAATAGGAAATCAAGACAATAAAAATAGGGATGATTTAATTGTCAATGGTTTTGCCCGA GTTGCTTTTCCCTTAACGGAAATTCAAAGTGTCAGGAATCATTTAGGAGTAATTATTGGGTCTGGTACCTTATTGGCATT ATTATTTACCTGGTTATTCGGCTCATTGATTGCCCAGTCTATTACTTATCCTTTGGAAGTTTTAAGTAAATGGACTGGGC AAGTTTCAAAAGGTGATTTTAGTGAAGATAAGCCAATAAACTCAAAAGATGAAATCGGGGAATTATCTCATAGATTTCAT CAAATGAAAAATAATTTATCAACAATTATGAGCCAATTGACGGAAGAAAAAAATAGATTATCAACACTATTAAATAATAT GCCCGATGGTGTTATCGAAATCAACCATAAAAGTGAAGTGACTCTTATAAATCCAGCTGCCAGGAGTTTTTTAAACATTA ATGCTTACGATTCCGTTGATCAACAAGAATTAGTATCATTAACTAGAAATTTTGATTTGAATAATGCTGTAACTCAGGTT CTTAAATCAGGGGAACAGGTTTCTAGAGAAACTGATTTTAACAATCAGATTGTTAGAATGTATGTTACTCCTCTACCTCT TTTTGAAGAAGGATCTAGAGGAGCTGTTGTGATACTTCAGGATATTACTGATTTAACTAAACTGGAACAGATGAGAAAAG AATTTATTTCGAATATTAGTCACGAATTGAAAACACCTTTAACATCGATAAAAGGCTTTGTAGAAACTCTAAAGGAAGAA ACTTTAGGTGAAAATAACACTCAACGGGAGTTTTTAAATATTATTGAAGAAGAGACGGATAGAGTTAGTAGACTGATTAA TGATTTAACTATACTTTCTAGGCTGGAAACTAATAAAGTTGAATTTAACCAAGATGAAGTTAATGTGCTAAACTTTTTAG ATAAAACCGTATCTATATCACAAAAAAGATGGCAGCAAGATGGATATCGGATATATAGAGGCGGAGTTCCTTTTGATTTA AAAGCTTTAATGGATGAGGATAAAATTCAGCAAGTTATTTTAAATTTGGTTGACAATGCGTGTCGTCATAATCCTCCGGG AACAAAAATCAAGCTAAAAGCAGTTTCTGAGAAGGATTATATAAGATTTTCTGTAACAGATAATGGTAAAGGGATCCCGG AAGAAGATAAAGAGAGAATTTTTGAAAGGTTTTATCGAGTTGATAAATCCAGGTATAGAGATTATGGAGGTACTGGTCTC GGGTTATCGATAGCAAAACATGCAGTTATTGGTCATAATTCAAGTTTAAATGTAATAAGTAGGGTCGGCCGTGGGACAAC ATTTTATTTTTATGTTAAAAGAATCCTTGATTAA
Upstream 100 bases:
>100_bases GACATCTACGCCAGAAAATTAGTGAAGCGGGTGGTCCTCCTGACTTAGTAGAGACAGTCAGGGGCATAGGATATCGTTTA AAAGAAATGGAGTAATTGTT
Downstream 100 bases:
>100_bases AAGAAATCCCCTTCTTAGGTGTTAATTAAACCCAGAAGGGGATTTCTTTTAATCAAGCCCAAAAACTATTTATTCGTCGT CATGTTCGCATTCATGTTCT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 597
Protein sequence:
>597_residues MRTIKSKINTAFSILIALAFISMGLYLFNYFSNFYLENLEDQLVNKAKMISHSIKDSELAGDALQEYVVTLGTDTGFRFT VVNNDGTVLAESEKNPEVMDNHLDRPEIKKAYEEGTGLHTRYSNTIDEDLLYAAVPIYNEEIGNQDNKNRDDLIVNGFAR VAFPLTEIQSVRNHLGVIIGSGTLLALLFTWLFGSLIAQSITYPLEVLSKWTGQVSKGDFSEDKPINSKDEIGELSHRFH QMKNNLSTIMSQLTEEKNRLSTLLNNMPDGVIEINHKSEVTLINPAARSFLNINAYDSVDQQELVSLTRNFDLNNAVTQV LKSGEQVSRETDFNNQIVRMYVTPLPLFEEGSRGAVVILQDITDLTKLEQMRKEFISNISHELKTPLTSIKGFVETLKEE TLGENNTQREFLNIIEEETDRVSRLINDLTILSRLETNKVEFNQDEVNVLNFLDKTVSISQKRWQQDGYRIYRGGVPFDL KALMDEDKIQQVILNLVDNACRHNPPGTKIKLKAVSEKDYIRFSVTDNGKGIPEEDKERIFERFYRVDKSRYRDYGGTGL GLSIAKHAVIGHNSSLNVISRVGRGTTFYFYVKRILD
Sequences:
>Translated_597_residues MRTIKSKINTAFSILIALAFISMGLYLFNYFSNFYLENLEDQLVNKAKMISHSIKDSELAGDALQEYVVTLGTDTGFRFT VVNNDGTVLAESEKNPEVMDNHLDRPEIKKAYEEGTGLHTRYSNTIDEDLLYAAVPIYNEEIGNQDNKNRDDLIVNGFAR VAFPLTEIQSVRNHLGVIIGSGTLLALLFTWLFGSLIAQSITYPLEVLSKWTGQVSKGDFSEDKPINSKDEIGELSHRFH QMKNNLSTIMSQLTEEKNRLSTLLNNMPDGVIEINHKSEVTLINPAARSFLNINAYDSVDQQELVSLTRNFDLNNAVTQV LKSGEQVSRETDFNNQIVRMYVTPLPLFEEGSRGAVVILQDITDLTKLEQMRKEFISNISHELKTPLTSIKGFVETLKEE TLGENNTQREFLNIIEEETDRVSRLINDLTILSRLETNKVEFNQDEVNVLNFLDKTVSISQKRWQQDGYRIYRGGVPFDL KALMDEDKIQQVILNLVDNACRHNPPGTKIKLKAVSEKDYIRFSVTDNGKGIPEEDKERIFERFYRVDKSRYRDYGGTGL GLSIAKHAVIGHNSSLNVISRVGRGTTFYFYVKRILD >Mature_597_residues MRTIKSKINTAFSILIALAFISMGLYLFNYFSNFYLENLEDQLVNKAKMISHSIKDSELAGDALQEYVVTLGTDTGFRFT VVNNDGTVLAESEKNPEVMDNHLDRPEIKKAYEEGTGLHTRYSNTIDEDLLYAAVPIYNEEIGNQDNKNRDDLIVNGFAR VAFPLTEIQSVRNHLGVIIGSGTLLALLFTWLFGSLIAQSITYPLEVLSKWTGQVSKGDFSEDKPINSKDEIGELSHRFH QMKNNLSTIMSQLTEEKNRLSTLLNNMPDGVIEINHKSEVTLINPAARSFLNINAYDSVDQQELVSLTRNFDLNNAVTQV LKSGEQVSRETDFNNQIVRMYVTPLPLFEEGSRGAVVILQDITDLTKLEQMRKEFISNISHELKTPLTSIKGFVETLKEE TLGENNTQREFLNIIEEETDRVSRLINDLTILSRLETNKVEFNQDEVNVLNFLDKTVSISQKRWQQDGYRIYRGGVPFDL KALMDEDKIQQVILNLVDNACRHNPPGTKIKLKAVSEKDYIRFSVTDNGKGIPEEDKERIFERFYRVDKSRYRDYGGTGL GLSIAKHAVIGHNSSLNVISRVGRGTTFYFYVKRILD
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1786600, Length=375, Percent_Identity=31.7333333333333, Blast_Score=168, Evalue=9e-43, Organism=Escherichia coli, GI1789149, Length=231, Percent_Identity=33.7662337662338, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI1788393, Length=217, Percent_Identity=28.110599078341, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI48994928, Length=386, Percent_Identity=25.3886010362694, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1788549, Length=379, Percent_Identity=25.5936675461741, Blast_Score=107, Evalue=3e-24, Organism=Escherichia coli, GI1790346, Length=213, Percent_Identity=31.4553990610329, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786783, Length=217, Percent_Identity=27.6497695852535, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI145693157, Length=251, Percent_Identity=27.0916334661355, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790861, Length=226, Percent_Identity=28.3185840707965, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786912, Length=221, Percent_Identity=24.8868778280543, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI87082128, Length=229, Percent_Identity=27.5109170305677, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787894, Length=258, Percent_Identity=27.1317829457364, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790436, Length=240, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI87081816, Length=227, Percent_Identity=28.1938325991189, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788713, Length=223, Percent_Identity=24.2152466367713, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790300, Length=232, Percent_Identity=26.2931034482759, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1789808, Length=242, Percent_Identity=25.2066115702479, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1788279, Length=241, Percent_Identity=25.7261410788382, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787374, Length=220, Percent_Identity=26.8181818181818, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789403, Length=212, Percent_Identity=28.7735849056604, Blast_Score=66, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 67888; Mature: 67888
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIKSKINTAFSILIALAFISMGLYLFNYFSNFYLENLEDQLVNKAKMISHSIKDSELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GDALQEYVVTLGTDTGFRFTVVNNDGTVLAESEKNPEVMDNHLDRPEIKKAYEEGTGLHT HHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCC RYSNTIDEDLLYAAVPIYNEEIGNQDNKNRDDLIVNGFARVAFPLTEIQSVRNHLGVIIG CCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCEEEC SGTLLALLFTWLFGSLIAQSITYPLEVLSKWTGQVSKGDFSEDKPINSKDEIGELSHRFH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QMKNNLSTIMSQLTEEKNRLSTLLNNMPDGVIEINHKSEVTLINPAARSFLNINAYDSVD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHEECCCCCCCC QQELVSLTRNFDLNNAVTQVLKSGEQVSRETDFNNQIVRMYVTPLPLFEEGSRGAVVILQ HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEH DITDLTKLEQMRKEFISNISHELKTPLTSIKGFVETLKEETLGENNTQREFLNIIEEETD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RVSRLINDLTILSRLETNKVEFNQDEVNVLNFLDKTVSISQKRWQQDGYRIYRGGVPFDL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH KALMDEDKIQQVILNLVDNACRHNPPGTKIKLKAVSEKDYIRFSVTDNGKGIPEEDKERI HHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHH FERFYRVDKSRYRDYGGTGLGLSIAKHAVIGHNSSLNVISRVGRGTTFYFYVKRILD HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHC >Mature Secondary Structure MRTIKSKINTAFSILIALAFISMGLYLFNYFSNFYLENLEDQLVNKAKMISHSIKDSELA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GDALQEYVVTLGTDTGFRFTVVNNDGTVLAESEKNPEVMDNHLDRPEIKKAYEEGTGLHT HHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCCCHHHHHCCCCHHHHHHHHHCCCCCC RYSNTIDEDLLYAAVPIYNEEIGNQDNKNRDDLIVNGFARVAFPLTEIQSVRNHLGVIIG CCCCCHHHHHHHHHCCHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCEEEC SGTLLALLFTWLFGSLIAQSITYPLEVLSKWTGQVSKGDFSEDKPINSKDEIGELSHRFH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH QMKNNLSTIMSQLTEEKNRLSTLLNNMPDGVIEINHKSEVTLINPAARSFLNINAYDSVD HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEECHHHHHHEECCCCCCCC QQELVSLTRNFDLNNAVTQVLKSGEQVSRETDFNNQIVRMYVTPLPLFEEGSRGAVVILQ HHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEH DITDLTKLEQMRKEFISNISHELKTPLTSIKGFVETLKEETLGENNTQREFLNIIEEETD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH RVSRLINDLTILSRLETNKVEFNQDEVNVLNFLDKTVSISQKRWQQDGYRIYRGGVPFDL HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH KALMDEDKIQQVILNLVDNACRHNPPGTKIKLKAVSEKDYIRFSVTDNGKGIPEEDKERI HHHHCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHH FERFYRVDKSRYRDYGGTGLGLSIAKHAVIGHNSSLNVISRVGRGTTFYFYVKRILD HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]