| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is phoU [H]
Identifier: 188585610
GI number: 188585610
Start: 1046847
End: 1047497
Strand: Direct
Name: phoU [H]
Synonym: Nther_0983
Alternate gene names: 188585610
Gene position: 1046847-1047497 (Clockwise)
Preceding gene: 188585609
Following gene: 188585611
Centisome position: 33.07
GC content: 32.41
Gene sequence:
>651_bases ATGGTTAGGGATACATTTGATCAGGAATTGACTGAGTTAAAAAACCAGGTCCTAGTCATGGGGGGAGCGGTGGAAAAAGC TATTTCAAAATCAATCGAAGGTTTAAAAAAGCAAGATGGAAAAATAGCGAGACAAGTAATTCAAGAAGACGATAGCATTG ATGATTTGGAATTAGAGATTGAAGATAAATGCTTAACTTTGATTGCCAGACATCAACCAATGGCTAAAGATTTGAGAAGA ATAGGTATAATTTTAAAATTAATCACAGATTTAGAGAGAATGGGCGATAAAGCGGCTTCAATATCTCATAAAACACTTAA TCTTTTGGATGAACCTTTTATTAAACCTTTAGTTGATATTCCTAGAATGGCTGATTTGACGGAAGAAATGGTGGAAAACT CATTGAATGCTTTTGTAAAAGAAAATGTAGATTTAGCATATCAAGTTATAGATGATGATAATAAAATTGATTATCTATAT GATCAAATTTTTCGTGAATTAGTTACTTACATGATAACTGATCCTAAGAAAATTTCTCAAGCTACGCAGCTAATGTTTGT GAGCAGTGATCTTGAAAGAATTAGTGATCATGCTACTAATTTAGGTGAATGGGTGATTTTTATGGTGACTGGTGATAGAA TAGATGTATAG
Upstream 100 bases:
>100_bases TTGTTGAGTTAGATAAAACGGATAAAGTATTTACTAATCCTAAAGACTCAAGAACTGAAGATTATATAACTGGCCGTTTT GGCTAAAAGGGGGATTTTAA
Downstream 100 bases:
>100_bases AATTAAACTCAGACTATTTAATTCAAGATATTTTAAGGTTTAAGGGAGGATCATCCAAGATGCATAGAATATTATTAGTC GAGGATGAACACCATATTGC
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MVRDTFDQELTELKNQVLVMGGAVEKAISKSIEGLKKQDGKIARQVIQEDDSIDDLELEIEDKCLTLIARHQPMAKDLRR IGIILKLITDLERMGDKAASISHKTLNLLDEPFIKPLVDIPRMADLTEEMVENSLNAFVKENVDLAYQVIDDDNKIDYLY DQIFRELVTYMITDPKKISQATQLMFVSSDLERISDHATNLGEWVIFMVTGDRIDV
Sequences:
>Translated_216_residues MVRDTFDQELTELKNQVLVMGGAVEKAISKSIEGLKKQDGKIARQVIQEDDSIDDLELEIEDKCLTLIARHQPMAKDLRR IGIILKLITDLERMGDKAASISHKTLNLLDEPFIKPLVDIPRMADLTEEMVENSLNAFVKENVDLAYQVIDDDNKIDYLY DQIFRELVTYMITDPKKISQATQLMFVSSDLERISDHATNLGEWVIFMVTGDRIDV >Mature_216_residues MVRDTFDQELTELKNQVLVMGGAVEKAISKSIEGLKKQDGKIARQVIQEDDSIDDLELEIEDKCLTLIARHQPMAKDLRR IGIILKLITDLERMGDKAASISHKTLNLLDEPFIKPLVDIPRMADLTEEMVENSLNAFVKENVDLAYQVIDDDNKIDYLY DQIFRELVTYMITDPKKISQATQLMFVSSDLERISDHATNLGEWVIFMVTGDRIDV
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=206, Percent_Identity=33.9805825242718, Blast_Score=142, Evalue=2e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24671; Mature: 24671
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRDTFDQELTELKNQVLVMGGAVEKAISKSIEGLKKQDGKIARQVIQEDDSIDDLELEI CCCCHHHHHHHHHHHHEEHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEH EDKCLTLIARHQPMAKDLRRIGIILKLITDLERMGDKAASISHKTLNLLDEPFIKPLVDI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PRMADLTEEMVENSLNAFVKENVDLAYQVIDDDNKIDYLYDQIFRELVTYMITDPKKISQ CHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHH ATQLMFVSSDLERISDHATNLGEWVIFMVTGDRIDV HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEECC >Mature Secondary Structure MVRDTFDQELTELKNQVLVMGGAVEKAISKSIEGLKKQDGKIARQVIQEDDSIDDLELEI CCCCHHHHHHHHHHHHEEHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCEEH EDKCLTLIARHQPMAKDLRRIGIILKLITDLERMGDKAASISHKTLNLLDEPFIKPLVDI HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC PRMADLTEEMVENSLNAFVKENVDLAYQVIDDDNKIDYLYDQIFRELVTYMITDPKKISQ CHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHH ATQLMFVSSDLERISDHATNLGEWVIFMVTGDRIDV HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]