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The map label for this gene is pqqE [H]

Identifier: 188585597

GI number: 188585597

Start: 1031511

End: 1032869

Strand: Direct

Name: pqqE [H]

Synonym: Nther_0970

Alternate gene names: 188585597

Gene position: 1031511-1032869 (Clockwise)

Preceding gene: 188585596

Following gene: 188585598

Centisome position: 32.59

GC content: 37.16

Gene sequence:

>1359_bases
ATGGTCATCAGTGGAACGGAACTAGGTAAGAGGTTTTTGGGAGAAAAGATTTTTCGACAGGTGATTTCTTACTTAGAAAA
AGATCCACTTAATAATATGAACCGAGGAATTGACTTAATCCTAAAGGCTCCCATCGCCGAACATCATCGTCAGATAATTC
ACAATATTAAGGACTACTTGGAAAATGATCCAGTAACTCAAAAATATATTCAAAGAATATTTAATAATACAAACGAGACC
TTTCGAAAAAAAGGAATCGTGAATTTTTTCCTTAATGCTACCTTAATGGGTGTTCCCAAACAATTGAAAGAGTCTGAAAA
ACTTGGAGTAAGTGTACCTTTTGCAATATTAATAGATCCTACTAGTAAATGTAATTTAAGGTGTAAAGGTTGTTGGGCTG
GTACCTACGATCATCATGACGAGCTGGATTTTGAAACAGTTGATAGATTAATTACGGAAGGTAAAGAACTGGGAATATAT
TTTATACCACTTTCAGGTGGAGAACCTTTTGCATGGGATCCCCTGTTAGAATTGTGTGAAAAACATGATGATGTTGTTTT
TATGCCATATACAAATGGGACATTAATAGATGAACAGAAAGTCGAAAAAATGGCTGAACTAGGTAATATTAGCCCTGCTA
TCAGTATTGAAGGCGACAGACAGTTAACTGATGAACGTCGTGGTAAAGGGGTATTTGATAAAGTTTCCAGTGTCATGGAA
AATTTAAGAGAAGCAGGAGTTCCCTTTGGTTTTAGTGTGACTTTAACTAGAGAGAATTGCGAACAAGTGATTTCTGAAGA
ATTTATTGACATGATGATAGATAAAGGTGCATTATACGGATGGTCGTTCCATTATATCCCAATTGGTAGGGAACCTGATT
TTTCTTTAATGTTAACTGCTGAGCAAAGGGCACAACTTGTGGAACGGGTTAATAGTCTTCGTAGTAGCAAACCTTTGAAG
TTTGCAGATTTTTGGAATGATGGTCATTTGAGCGGCGGATGTATTGCTGGTGGTAGGCGTTATTTCCACATCACAGCTAA
AGGTGACATTGAGCCTTGTGCTTTTATCCATTTTGCCGTCGAAAATATTCAAGACAAATCTTTAAAAGAAATACTTCAAA
CACCAATTTTCAAATCTTATCAAAAACGCCAACCCTTTGATGAAAATTATCTTAGACCATGCCCATTAATTGATGTTCCA
GATGCATTAAGGGAAATAGTTGATGAAACTGGAGCTACTTCTACAGACAGTGGTTCAGATACTATCTTGACAGGAAAAGA
AGCAGAAGAAATGGATAAGGTGGCAACTTCCTGGAAGAAAGCCGCCGATGAGATAGCCTCGGGTAGAGTGTCCGAGTAA

Upstream 100 bases:

>100_bases
ATTCTACAAAAAGGGGGCCATTTTAGCAAATTTTTGTTATAATTACATATGAATAGGTAAGGGTGTTTGAGTACTTGTAT
CTCAAAGGGGGGAGAGGATT

Downstream 100 bases:

>100_bases
TATAGTAAAGAGAGAACGGATGTACCTGCATGCCTTTTTTGATTACCAGCGTCCACAGGTAATTGTAATTATTGGTGAGA
TGTGCAAAGCTTGAGTGTAA

Product: Radical SAM domain protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MVISGTELGKRFLGEKIFRQVISYLEKDPLNNMNRGIDLILKAPIAEHHRQIIHNIKDYLENDPVTQKYIQRIFNNTNET
FRKKGIVNFFLNATLMGVPKQLKESEKLGVSVPFAILIDPTSKCNLRCKGCWAGTYDHHDELDFETVDRLITEGKELGIY
FIPLSGGEPFAWDPLLELCEKHDDVVFMPYTNGTLIDEQKVEKMAELGNISPAISIEGDRQLTDERRGKGVFDKVSSVME
NLREAGVPFGFSVTLTRENCEQVISEEFIDMMIDKGALYGWSFHYIPIGREPDFSLMLTAEQRAQLVERVNSLRSSKPLK
FADFWNDGHLSGGCIAGGRRYFHITAKGDIEPCAFIHFAVENIQDKSLKEILQTPIFKSYQKRQPFDENYLRPCPLIDVP
DALREIVDETGATSTDSGSDTILTGKEAEEMDKVATSWKKAADEIASGRVSE

Sequences:

>Translated_452_residues
MVISGTELGKRFLGEKIFRQVISYLEKDPLNNMNRGIDLILKAPIAEHHRQIIHNIKDYLENDPVTQKYIQRIFNNTNET
FRKKGIVNFFLNATLMGVPKQLKESEKLGVSVPFAILIDPTSKCNLRCKGCWAGTYDHHDELDFETVDRLITEGKELGIY
FIPLSGGEPFAWDPLLELCEKHDDVVFMPYTNGTLIDEQKVEKMAELGNISPAISIEGDRQLTDERRGKGVFDKVSSVME
NLREAGVPFGFSVTLTRENCEQVISEEFIDMMIDKGALYGWSFHYIPIGREPDFSLMLTAEQRAQLVERVNSLRSSKPLK
FADFWNDGHLSGGCIAGGRRYFHITAKGDIEPCAFIHFAVENIQDKSLKEILQTPIFKSYQKRQPFDENYLRPCPLIDVP
DALREIVDETGATSTDSGSDTILTGKEAEEMDKVATSWKKAADEIASGRVSE
>Mature_452_residues
MVISGTELGKRFLGEKIFRQVISYLEKDPLNNMNRGIDLILKAPIAEHHRQIIHNIKDYLENDPVTQKYIQRIFNNTNET
FRKKGIVNFFLNATLMGVPKQLKESEKLGVSVPFAILIDPTSKCNLRCKGCWAGTYDHHDELDFETVDRLITEGKELGIY
FIPLSGGEPFAWDPLLELCEKHDDVVFMPYTNGTLIDEQKVEKMAELGNISPAISIEGDRQLTDERRGKGVFDKVSSVME
NLREAGVPFGFSVTLTRENCEQVISEEFIDMMIDKGALYGWSFHYIPIGREPDFSLMLTAEQRAQLVERVNSLRSSKPLK
FADFWNDGHLSGGCIAGGRRYFHITAKGDIEPCAFIHFAVENIQDKSLKEILQTPIFKSYQKRQPFDENYLRPCPLIDVP
DALREIVDETGATSTDSGSDTILTGKEAEEMDKVATSWKKAADEIASGRVSE

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 51129; Mature: 51129

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISGTELGKRFLGEKIFRQVISYLEKDPLNNMNRGIDLILKAPIAEHHRQIIHNIKDYL
CEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHH
ENDPVTQKYIQRIFNNTNETFRKKGIVNFFLNATLMGVPKQLKESEKLGVSVPFAILIDP
CCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECC
TSKCNLRCKGCWAGTYDHHDELDFETVDRLITEGKELGIYFIPLSGGEPFAWDPLLELCE
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
KHDDVVFMPYTNGTLIDEQKVEKMAELGNISPAISIEGDRQLTDERRGKGVFDKVSSVME
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHH
NLREAGVPFGFSVTLTRENCEQVISEEFIDMMIDKGALYGWSFHYIPIGREPDFSLMLTA
HHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEECEEEEEEECCCCCCCEEEEEH
EQRAQLVERVNSLRSSKPLKFADFWNDGHLSGGCIAGGRRYFHITAKGDIEPCAFIHFAV
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHH
ENIQDKSLKEILQTPIFKSYQKRQPFDENYLRPCPLIDVPDALREIVDETGATSTDSGSD
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
TILTGKEAEEMDKVATSWKKAADEIASGRVSE
CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVISGTELGKRFLGEKIFRQVISYLEKDPLNNMNRGIDLILKAPIAEHHRQIIHNIKDYL
CEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHHH
ENDPVTQKYIQRIFNNTNETFRKKGIVNFFLNATLMGVPKQLKESEKLGVSVPFAILIDP
CCCCHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECC
TSKCNLRCKGCWAGTYDHHDELDFETVDRLITEGKELGIYFIPLSGGEPFAWDPLLELCE
CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHH
KHDDVVFMPYTNGTLIDEQKVEKMAELGNISPAISIEGDRQLTDERRGKGVFDKVSSVME
CCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHCCCHHHHHHHHHH
NLREAGVPFGFSVTLTRENCEQVISEEFIDMMIDKGALYGWSFHYIPIGREPDFSLMLTA
HHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCEECEEEEEEECCCCCCCEEEEEH
EQRAQLVERVNSLRSSKPLKFADFWNDGHLSGGCIAGGRRYFHITAKGDIEPCAFIHFAV
HHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEECCEEEEEEEECCCCCHHHHHHHHH
ENIQDKSLKEILQTPIFKSYQKRQPFDENYLRPCPLIDVPDALREIVDETGATSTDSGSD
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
TILTGKEAEEMDKVATSWKKAADEIASGRVSE
CEEECCCHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA