| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is yjjG [C]
Identifier: 188585573
GI number: 188585573
Start: 1002516
End: 1003217
Strand: Direct
Name: yjjG [C]
Synonym: Nther_0945
Alternate gene names: 188585573
Gene position: 1002516-1003217 (Clockwise)
Preceding gene: 188585572
Following gene: 188585574
Centisome position: 31.67
GC content: 35.47
Gene sequence:
>702_bases ATGGGTATTATCTGGGATTTGGATGGTACTTTATACAATTTCTACTTACCGGCCAAAATATCTTTACATGTAACCTGGGA ATATGGATGGTATAATGACTATGTAAAGAAACAGGAGTGTTACCACTTTTTTGAACAATCTCATGGTGAATATGTTTGGG AATTGAGGTTCTGGGAACAATTATATAAATCAACTCAGAAAAACTATGGCCAGGAGACCACAATCAATGCCATGGCCGAT ATCATTAACAAGGCCTGGTATATAAATAATAATCCTAACTCAAAATCCAATGCATATGAACTGGGAAAACTGTGGTGGAA AACTTTTTTTGAGAACTTATCTCCAGAACCCTGGGTGTTACCACTTCTAAGAAAATTATTCAAGCATGGGATTCCCATGG GATTGTTGTCAAATAGCCCACGGGAAATGGGAAAGTTAAAATTAAAGCATTTAGGATTAGAAGATTTCTTTAATGAAGAA AATACGATTTGGACAGTGGATACTGGGTATTTTAAACCAGATAAATATCCATTTCTACTTATGAGTGAGATACTAAATTG TCAAACTAACCAGGTTTTAGTGGTAGGGGACAATTATAAAACTGATGCCTTGGGAGCTCAAAATGCCGGAATGACTTATT TTTTGTACAAGGGAGATAACTTTGGAGAATTACTGAAAAGACTTAAAGCTTTTTGGAGGTGA
Upstream 100 bases:
>100_bases CATGTAGAATCTGCTCTGGATATGGGATATATATCTAAAATGTTAAATTGCAATTTGCAATGTAAAAATTAACTACAAAT TGATGAAAAGGTGACTTTAA
Downstream 100 bases:
>100_bases AGTTTGTGTTGAAACTGAGAGACTATATTAGAGATATTCCGGATTTTCCTAAAAAAGGAGTTGTGTTTAAAGATATTACC ACAGCTTTGAAAGATCCCGA
Product: Haloacid dehalogenase domain protein hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MGIIWDLDGTLYNFYLPAKISLHVTWEYGWYNDYVKKQECYHFFEQSHGEYVWELRFWEQLYKSTQKNYGQETTINAMAD IINKAWYINNNPNSKSNAYELGKLWWKTFFENLSPEPWVLPLLRKLFKHGIPMGLLSNSPREMGKLKLKHLGLEDFFNEE NTIWTVDTGYFKPDKYPFLLMSEILNCQTNQVLVVGDNYKTDALGAQNAGMTYFLYKGDNFGELLKRLKAFWR
Sequences:
>Translated_233_residues MGIIWDLDGTLYNFYLPAKISLHVTWEYGWYNDYVKKQECYHFFEQSHGEYVWELRFWEQLYKSTQKNYGQETTINAMAD IINKAWYINNNPNSKSNAYELGKLWWKTFFENLSPEPWVLPLLRKLFKHGIPMGLLSNSPREMGKLKLKHLGLEDFFNEE NTIWTVDTGYFKPDKYPFLLMSEILNCQTNQVLVVGDNYKTDALGAQNAGMTYFLYKGDNFGELLKRLKAFWR >Mature_232_residues GIIWDLDGTLYNFYLPAKISLHVTWEYGWYNDYVKKQECYHFFEQSHGEYVWELRFWEQLYKSTQKNYGQETTINAMADI INKAWYINNNPNSKSNAYELGKLWWKTFFENLSPEPWVLPLLRKLFKHGIPMGLLSNSPREMGKLKLKHLGLEDFFNEEN TIWTVDTGYFKPDKYPFLLMSEILNCQTNQVLVVGDNYKTDALGAQNAGMTYFLYKGDNFGELLKRLKAFWR
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27688; Mature: 27557
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00761 SPASE_I_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIIWDLDGTLYNFYLPAKISLHVTWEYGWYNDYVKKQECYHFFEQSHGEYVWELRFWEQ CCEEECCCCCEEEEEECEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH LYKSTQKNYGQETTINAMADIINKAWYINNNPNSKSNAYELGKLWWKTFFENLSPEPWVL HHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH PLLRKLFKHGIPMGLLSNSPREMGKLKLKHLGLEDFFNEENTIWTVDTGYFKPDKYPFLL HHHHHHHHCCCCEEHHCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCHHHH MSEILNCQTNQVLVVGDNYKTDALGAQNAGMTYFLYKGDNFGELLKRLKAFWR HHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure GIIWDLDGTLYNFYLPAKISLHVTWEYGWYNDYVKKQECYHFFEQSHGEYVWELRFWEQ CEEECCCCCEEEEEECEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH LYKSTQKNYGQETTINAMADIINKAWYINNNPNSKSNAYELGKLWWKTFFENLSPEPWVL HHHHHHHHCCCCHHHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH PLLRKLFKHGIPMGLLSNSPREMGKLKLKHLGLEDFFNEENTIWTVDTGYFKPDKYPFLL HHHHHHHHCCCCEEHHCCCHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCCCCHHHH MSEILNCQTNQVLVVGDNYKTDALGAQNAGMTYFLYKGDNFGELLKRLKAFWR HHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA