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The map label for this gene is 188585553

Identifier: 188585553

GI number: 188585553

Start: 982375

End: 983652

Strand: Reverse

Name: 188585553

Synonym: Nther_0925

Alternate gene names: NA

Gene position: 983652-982375 (Counterclockwise)

Preceding gene: 188585555

Following gene: 188585552

Centisome position: 31.07

GC content: 37.72

Gene sequence:

>1278_bases
ATGGAACTAACACAAAAACTAGCCATTTTAGCTCAAGGTGCCAGATACGATGTATCCTGTTCCTCTAGTGGTTCTAGAAG
AGCCAGAACAGAAGGCGGTTTTGGGAATGCATCTAAAAGCGGTATCTGTCATAGTTGGACAGAAGATGGAAGATGTGTAT
CTTTACTAAAAATCCTATTTACCAATAAATGCATCTACGATTGTTTTTATTGTGCTAATGGAGCCTCTAACAATATTCAC
AGGGCCACCTTCACTCCTGAAGAAGTGTGTCAGCTAACTGAAGAATTTTATCGTAGAAACTATATAGAAGGACTGTTTCT
TAGCTCTGCCATTTTAAACAACGAAGATTACACTATGGAATTGTTAGCAACAACTGTTAAGATGTTACGTGAAGACTATA
GATTCAACGGATACATTCACTTAAAAGGCATCCCAGGTGCGGATAAAACTTTGTTGATTGAGGCCGGTAAACATGTAGAT
CGGTTGAGCATCAATATTGAACTACCAACGCAAAAAAGTTTACAATTGTTAGCTCCAGAAAAAAATGGTAAAGAGATAGT
TTCCTCAATGAAGGCAGTTAGTCATAAAATTAAAGAAACCAAGCTAAATAGGCCTGCAAGAACCGAAAAGACAAGCAAAT
CTAGGCCCAAAAAAACTTCTTCCAAACAATCTTTTGTCCCAGCAGGTCAAAGTACTCAATTAATTGTTGGCGCCACTAAT
GATTCTGATCGAGATATTCTCAGACTCTCGGAAAACCTTTATCAACAGATAGGCCTAAAACGAGTATTTTACTCGGCCTT
TATACCTATTAGCAACAAACACAAAGAAAAACTTCCAGCAATAGCCGAACCTCCTTACTTGAGAGAACACAGACTATACC
AGGCGGATTGGCTGTTAAGATTTTATAAATTTAATTATCAAGAGCTTTTTGATAATCAAGACACTAACCTGTCCTTGGAG
CTTGATCCAAAAGCCCAATTTGCTTTAAGAAACTTCCACCTCTTCCCCCAGGAAATTAATCAAGCTAGTAAAAAAATGTT
ATTAAGAATTCCTGGGATTGGCCCAAAATCTGCAAGAAGAATCTTGAAAGCCCGAAAACACTTCCAATTGGGCTTTGAAG
ATCTAAAGCGTATGGGAATTGTCCTAAAACGGGCTAAATATTTTATCACTTGCAAAGGCAAATATTACGGTGGGATACCT
TTTAAGCCTGATCTCATTTATTCTAGGCTGCTAAAGGGTCCTGAATACAAACAATTATCTTTGTGGGGTGGTAATTAA

Upstream 100 bases:

>100_bases
ACCAGCCCGAAACATTGGATGTGAAATTCAAGAGCACAACATCAACATACAACTCTAATACAGCCTTTTAAAGAGAGAGA
ATTTGAGGGAGGAATTAGTT

Downstream 100 bases:

>100_bases
ATGCATTCAGTAACTTATTACATTTATGACGGTACTTATGAGGGGTTATTAACCAGTTTATATTATGTTTTTAAATCCTC
TGAAAATACACCTAAAATTG

Product: helix-hairpin-helix motif

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MELTQKLAILAQGARYDVSCSSSGSRRARTEGGFGNASKSGICHSWTEDGRCVSLLKILFTNKCIYDCFYCANGASNNIH
RATFTPEEVCQLTEEFYRRNYIEGLFLSSAILNNEDYTMELLATTVKMLREDYRFNGYIHLKGIPGADKTLLIEAGKHVD
RLSINIELPTQKSLQLLAPEKNGKEIVSSMKAVSHKIKETKLNRPARTEKTSKSRPKKTSSKQSFVPAGQSTQLIVGATN
DSDRDILRLSENLYQQIGLKRVFYSAFIPISNKHKEKLPAIAEPPYLREHRLYQADWLLRFYKFNYQELFDNQDTNLSLE
LDPKAQFALRNFHLFPQEINQASKKMLLRIPGIGPKSARRILKARKHFQLGFEDLKRMGIVLKRAKYFITCKGKYYGGIP
FKPDLIYSRLLKGPEYKQLSLWGGN

Sequences:

>Translated_425_residues
MELTQKLAILAQGARYDVSCSSSGSRRARTEGGFGNASKSGICHSWTEDGRCVSLLKILFTNKCIYDCFYCANGASNNIH
RATFTPEEVCQLTEEFYRRNYIEGLFLSSAILNNEDYTMELLATTVKMLREDYRFNGYIHLKGIPGADKTLLIEAGKHVD
RLSINIELPTQKSLQLLAPEKNGKEIVSSMKAVSHKIKETKLNRPARTEKTSKSRPKKTSSKQSFVPAGQSTQLIVGATN
DSDRDILRLSENLYQQIGLKRVFYSAFIPISNKHKEKLPAIAEPPYLREHRLYQADWLLRFYKFNYQELFDNQDTNLSLE
LDPKAQFALRNFHLFPQEINQASKKMLLRIPGIGPKSARRILKARKHFQLGFEDLKRMGIVLKRAKYFITCKGKYYGGIP
FKPDLIYSRLLKGPEYKQLSLWGGN
>Mature_425_residues
MELTQKLAILAQGARYDVSCSSSGSRRARTEGGFGNASKSGICHSWTEDGRCVSLLKILFTNKCIYDCFYCANGASNNIH
RATFTPEEVCQLTEEFYRRNYIEGLFLSSAILNNEDYTMELLATTVKMLREDYRFNGYIHLKGIPGADKTLLIEAGKHVD
RLSINIELPTQKSLQLLAPEKNGKEIVSSMKAVSHKIKETKLNRPARTEKTSKSRPKKTSSKQSFVPAGQSTQLIVGATN
DSDRDILRLSENLYQQIGLKRVFYSAFIPISNKHKEKLPAIAEPPYLREHRLYQADWLLRFYKFNYQELFDNQDTNLSLE
LDPKAQFALRNFHLFPQEINQASKKMLLRIPGIGPKSARRILKARKHFQLGFEDLKRMGIVLKRAKYFITCKGKYYGGIP
FKPDLIYSRLLKGPEYKQLSLWGGN

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48561; Mature: 48561

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTQKLAILAQGARYDVSCSSSGSRRARTEGGFGNASKSGICHSWTEDGRCVSLLKILF
CCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TNKCIYDCFYCANGASNNIHRATFTPEEVCQLTEEFYRRNYIEGLFLSSAILNNEDYTME
HCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LLATTVKMLREDYRFNGYIHLKGIPGADKTLLIEAGKHVDRLSINIELPTQKSLQLLAPE
HHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCCEEECCC
KNGKEIVSSMKAVSHKIKETKLNRPARTEKTSKSRPKKTSSKQSFVPAGQSTQLIVGATN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
DSDRDILRLSENLYQQIGLKRVFYSAFIPISNKHKEKLPAIAEPPYLREHRLYQADWLLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCHHHHHHHHH
FYKFNYQELFDNQDTNLSLELDPKAQFALRNFHLFPQEINQASKKMLLRIPGIGPKSARR
HHHCCHHHHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHEEEECCCCCHHHHHH
ILKARKHFQLGFEDLKRMGIVLKRAKYFITCKGKYYGGIPFKPDLIYSRLLKGPEYKQLS
HHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHHCCCCCCEEE
LWGGN
EECCC
>Mature Secondary Structure
MELTQKLAILAQGARYDVSCSSSGSRRARTEGGFGNASKSGICHSWTEDGRCVSLLKILF
CCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
TNKCIYDCFYCANGASNNIHRATFTPEEVCQLTEEFYRRNYIEGLFLSSAILNNEDYTME
HCHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
LLATTVKMLREDYRFNGYIHLKGIPGADKTLLIEAGKHVDRLSINIELPTQKSLQLLAPE
HHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCCCCEEECCC
KNGKEIVSSMKAVSHKIKETKLNRPARTEKTSKSRPKKTSSKQSFVPAGQSTQLIVGATN
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
DSDRDILRLSENLYQQIGLKRVFYSAFIPISNKHKEKLPAIAEPPYLREHRLYQADWLLR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHCHHHHHHHHH
FYKFNYQELFDNQDTNLSLELDPKAQFALRNFHLFPQEINQASKKMLLRIPGIGPKSARR
HHHCCHHHHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHEEEECCCCCHHHHHH
ILKARKHFQLGFEDLKRMGIVLKRAKYFITCKGKYYGGIPFKPDLIYSRLLKGPEYKQLS
HHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCEECCCCCCHHHHHHHHHCCCCCCEEE
LWGGN
EECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA