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The map label for this gene is yccM [C]

Identifier: 188585541

GI number: 188585541

Start: 968877

End: 969602

Strand: Direct

Name: yccM [C]

Synonym: Nther_0913

Alternate gene names: 188585541

Gene position: 968877-969602 (Clockwise)

Preceding gene: 188585540

Following gene: 188585542

Centisome position: 30.61

GC content: 32.51

Gene sequence:

>726_bases
ATGTCAACTGCATCTTATTTTATTAAAACAAATAGGTCATTTTCTTTGATCAGAAAATATGCGTGGTTTGTGACACTTTT
GATCGGAGTTGGAGGTCAATTTTTACCACAACTTGGGTTACTAGTTCCATTCATAATGATTGCTTTAATTGTTATGAGTC
TCTTTAAAGGAAAATATTGGTGTGGAAACTTTTGCCCTCATGGTAGTTTTTTTGACCAGTTAATTTTACCAATCAGCAGA
AATGTTAGAATACCAAACTTTTTAAAATCCAAGCTTGTTATCGCTGCTGTTTTTCTTTTATTTATTATTAATTTGTCGAT
TCGATTTGTGATTATAATTCAACAAATGGGTACAGAACCTTTGACTCACAGATTAGGCTTTATGTTTGCAAACACTTATT
TAATGGTGCTACTTGTTGGAGGTCTACTTGGTGTAGTGATCAATGCCAGAACCTGGTGTCAGTTTTGTCCTATGGGGACT
ATGGAATCAATTTTTTATAAATTAGGTAAAAAATTAGGTCTAACCAAAAAATTTGATGAAAAAGTGACCATTGAACATCC
TGATTTATGTCATTCCTGTGGTAAATGTTCCAGGGTATGTCCTATGCAGTTAGAACCGCATAAAAACTTTTCAGAAAATC
ATCAATTTGAAGATGAAAGATGTATTAGATGTTATACTTGTGTTAACAATTGTCCGGCTAAAATTTTGCAAATGAATGCA
TCGTAA

Upstream 100 bases:

>100_bases
AATCTGACAGGAAATGAAAATTAAAAGTATGAAATAATCATTGAGCTTTACAAGGGAGGTATTGTTGGTAAAAACTCACT
GATAGAGGGAGGAAATTATT

Downstream 100 bases:

>100_bases
TGCCTTAAATAGCGGGTAACTGAAAAGTAATGATAATTATTATAAATATAAAAAAAGACTTGACTAATTTGCTAATGACT
GGTATATATATAGTAGAAGA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MSTASYFIKTNRSFSLIRKYAWFVTLLIGVGGQFLPQLGLLVPFIMIALIVMSLFKGKYWCGNFCPHGSFFDQLILPISR
NVRIPNFLKSKLVIAAVFLLFIINLSIRFVIIIQQMGTEPLTHRLGFMFANTYLMVLLVGGLLGVVINARTWCQFCPMGT
MESIFYKLGKKLGLTKKFDEKVTIEHPDLCHSCGKCSRVCPMQLEPHKNFSENHQFEDERCIRCYTCVNNCPAKILQMNA
S

Sequences:

>Translated_241_residues
MSTASYFIKTNRSFSLIRKYAWFVTLLIGVGGQFLPQLGLLVPFIMIALIVMSLFKGKYWCGNFCPHGSFFDQLILPISR
NVRIPNFLKSKLVIAAVFLLFIINLSIRFVIIIQQMGTEPLTHRLGFMFANTYLMVLLVGGLLGVVINARTWCQFCPMGT
MESIFYKLGKKLGLTKKFDEKVTIEHPDLCHSCGKCSRVCPMQLEPHKNFSENHQFEDERCIRCYTCVNNCPAKILQMNA
S
>Mature_240_residues
STASYFIKTNRSFSLIRKYAWFVTLLIGVGGQFLPQLGLLVPFIMIALIVMSLFKGKYWCGNFCPHGSFFDQLILPISRN
VRIPNFLKSKLVIAAVFLLFIINLSIRFVIIIQQMGTEPLTHRLGFMFANTYLMVLLVGGLLGVVINARTWCQFCPMGTM
ESIFYKLGKKLGLTKKFDEKVTIEHPDLCHSCGKCSRVCPMQLEPHKNFSENHQFEDERCIRCYTCVNNCPAKILQMNAS

Specific function: Unknown

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27469; Mature: 27338

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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C
>Mature Secondary Structure 
STASYFIKTNRSFSLIRKYAWFVTLLIGVGGQFLPQLGLLVPFIMIALIVMSLFKGKYW
CCCCEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
CGNFCPHGSFFDQLILPISRNVRIPNFLKSKLVIAAVFLLFIINLSIRFVIIIQQMGTEP
CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LTHRLGFMFANTYLMVLLVGGLLGVVINARTWCQFCPMGTMESIFYKLGKKLGLTKKFDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
KVTIEHPDLCHSCGKCSRVCPMQLEPHKNFSENHQFEDERCIRCYTCVNNCPAKILQMNA
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA