| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is thrB
Identifier: 188585538
GI number: 188585538
Start: 964543
End: 965478
Strand: Direct
Name: thrB
Synonym: Nther_0910
Alternate gene names: 188585538
Gene position: 964543-965478 (Clockwise)
Preceding gene: 188585537
Following gene: 188585540
Centisome position: 30.47
GC content: 39.1
Gene sequence:
>936_bases GTGGAAGAAAAAAATTTAGTAAAAGTTCAAGTACCGGGAACTTCGGCTAATTTAGGAGCGGGTTTTGATTCTATGGGAAT TGCTCTAAATATTTATAATTATGTCAGCCTAAGACAGTTAGAACCTGGTTCTGGCGTAATAATAGAAGTCAAGGGCGAGG GAGCGGATTTCATATCTAGAGACAAAGATAATCTTGTATATCAAGCTATTGCTGGAGTTTATCGCGAAATTTATGGTTCA GATGTCCTAATACCTGATTTAGAAATAACCTTGGAAAATAATATACCACTGGCTAGAGGACTTGGTAGCAGTGCGGCAGC CATAGTGGGTGGAGCAGTAGCTGCTAATGAGATGTTTAATGGTGAATTAACCAGGGACGAGTTGTTGAAACATGTGTTAG AACTTGAGGGCCACCTTGATAATATAGCACCAGCTATGTATGGAGGATTAACCTGTAGTCTAATAACTCGGGAAAACGAA TTAATGTTCAGAACAGTTGATGTAGTAGAAGATTGGAATTTCATCATAATTGTACCTGGTCAAGAACTATCAACTCAAAA AGCCCGAGAAGCTTTACCAGAAAGAATTGCGTTTCAAGATGGTTTGTTTAATTTGAGTCGAGCTAATATGTTGATCTTAG CCTTTCAACAGCGAGATTATGAATTGTTATGGCATAGTATGGATGACGAACTTCATGAGCCCTACCGGGCAAAATTAATA CCCGGCTTGGATAGATTGTTGCAAGAAGTACGAGGGGCGGGTATTCCTGCTGCTATTAGTGGAGCAGGTCCTTCTATAGC ATGTGTTTTAAGTGAGATTGAAGAAGAAAAAATTGTCCGTGAGCTCGGAAAAGAGAAATTTAGTGCTCACGGAATCGAGA GCAATTTTTTCAAATTAAAACCCGATAACTCTGGAGCCAAGTCTATATTACATTAA
Upstream 100 bases:
>100_bases GAGGATCAGGTTTTAGACGCGGTTTATTCATAAATTATTATTTATTGCGATATATTCATTAGTTAGTAATATAACGATTT TGAAATAGGGTGGTGTTAAA
Downstream 100 bases:
>100_bases AGGTGAAAATAGTCTTAAGATGTCTTCAATTATTTTTCTTATGGCACCTCTATTTTTAAACTCTTCCCAATAAAGAGGAG AGGAGTTGTAAATATCTTGT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MEEKNLVKVQVPGTSANLGAGFDSMGIALNIYNYVSLRQLEPGSGVIIEVKGEGADFISRDKDNLVYQAIAGVYREIYGS DVLIPDLEITLENNIPLARGLGSSAAAIVGGAVAANEMFNGELTRDELLKHVLELEGHLDNIAPAMYGGLTCSLITRENE LMFRTVDVVEDWNFIIIVPGQELSTQKAREALPERIAFQDGLFNLSRANMLILAFQQRDYELLWHSMDDELHEPYRAKLI PGLDRLLQEVRGAGIPAAISGAGPSIACVLSEIEEEKIVRELGKEKFSAHGIESNFFKLKPDNSGAKSILH
Sequences:
>Translated_311_residues MEEKNLVKVQVPGTSANLGAGFDSMGIALNIYNYVSLRQLEPGSGVIIEVKGEGADFISRDKDNLVYQAIAGVYREIYGS DVLIPDLEITLENNIPLARGLGSSAAAIVGGAVAANEMFNGELTRDELLKHVLELEGHLDNIAPAMYGGLTCSLITRENE LMFRTVDVVEDWNFIIIVPGQELSTQKAREALPERIAFQDGLFNLSRANMLILAFQQRDYELLWHSMDDELHEPYRAKLI PGLDRLLQEVRGAGIPAAISGAGPSIACVLSEIEEEKIVRELGKEKFSAHGIESNFFKLKPDNSGAKSILH >Mature_311_residues MEEKNLVKVQVPGTSANLGAGFDSMGIALNIYNYVSLRQLEPGSGVIIEVKGEGADFISRDKDNLVYQAIAGVYREIYGS DVLIPDLEITLENNIPLARGLGSSAAAIVGGAVAANEMFNGELTRDELLKHVLELEGHLDNIAPAMYGGLTCSLITRENE LMFRTVDVVEDWNFIIIVPGQELSTQKAREALPERIAFQDGLFNLSRANMLILAFQQRDYELLWHSMDDELHEPYRAKLI PGLDRLLQEVRGAGIPAAISGAGPSIACVLSEIEEEKIVRELGKEKFSAHGIESNFFKLKPDNSGAKSILH
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily
Homologues:
Organism=Escherichia coli, GI1786184, Length=319, Percent_Identity=31.3479623824451, Blast_Score=130, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6321814, Length=351, Percent_Identity=29.6296296296296, Blast_Score=129, Evalue=5e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KHSE_NATTJ (B2A8C9)
Other databases:
- EMBL: CP001034 - RefSeq: YP_001917083.1 - ProteinModelPortal: B2A8C9 - GeneID: 6314962 - GenomeReviews: CP001034_GR - KEGG: nth:Nther_0910 - HOGENOM: HBG646290 - OMA: FDCLGAA - GO: GO:0005737 - HAMAP: MF_00384 - InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.230.10 - PIRSF: PIRSF000676 - PRINTS: PR00958 - TIGRFAMs: TIGR00191
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =2.7.1.39
Molecular weight: Translated: 34093; Mature: 34093
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKNLVKVQVPGTSANLGAGFDSMGIALNIYNYVSLRQLEPGSGVIIEVKGEGADFISR CCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCHHCC DKDNLVYQAIAGVYREIYGSDVLIPDLEITLENNIPLARGLGSSAAAIVGGAVAANEMFN CCCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHCC GELTRDELLKHVLELEGHLDNIAPAMYGGLTCSLITRENELMFRTVDVVEDWNFIIIVPG CCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCCCEEEEEEEHHCCCCEEEEECC QELSTQKAREALPERIAFQDGLFNLSRANMLILAFQQRDYELLWHSMDDELHEPYRAKLI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHCCHHHCCCHHHHHC PGLDRLLQEVRGAGIPAAISGAGPSIACVLSEIEEEKIVRELGKEKFSAHGIESNFFKLK CCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC PDNSGAKSILH CCCCCHHHHCC >Mature Secondary Structure MEEKNLVKVQVPGTSANLGAGFDSMGIALNIYNYVSLRQLEPGSGVIIEVKGEGADFISR CCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCHHCC DKDNLVYQAIAGVYREIYGSDVLIPDLEITLENNIPLARGLGSSAAAIVGGAVAANEMFN CCCHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHHCC GELTRDELLKHVLELEGHLDNIAPAMYGGLTCSLITRENELMFRTVDVVEDWNFIIIVPG CCCCHHHHHHHHHHHHCCHHHHHHHHHCCEEEEEEECCCCEEEEEEEHHCCCCEEEEECC QELSTQKAREALPERIAFQDGLFNLSRANMLILAFQQRDYELLWHSMDDELHEPYRAKLI CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHCCHHHCCCHHHHHC PGLDRLLQEVRGAGIPAAISGAGPSIACVLSEIEEEKIVRELGKEKFSAHGIESNFFKLK CCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC PDNSGAKSILH CCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA