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The map label for this gene is sbcD [C]

Identifier: 188585524

GI number: 188585524

Start: 945825

End: 947033

Strand: Direct

Name: sbcD [C]

Synonym: Nther_0896

Alternate gene names: 188585524

Gene position: 945825-947033 (Clockwise)

Preceding gene: 188585521

Following gene: 188585525

Centisome position: 29.88

GC content: 34.66

Gene sequence:

>1209_bases
GTGTTGCGAATTTTACATACTGCCGATATCCATTTGAAAACAGGTTGTGATGAGAGATGGAGGGCTTTAGAAGAGCTGAT
CGCTAGAGGACAGAAAGAAGATATTGACCTACTAATAATTTGTGGTGATTTGTTTGATAGTAGCCAGGATGCTGTAAATT
TATATAATTATCTGAGGTCATTATTCACCAATACCGGTTATAGAATTGTTATTTTACCTGGAAATCATGATTTAGATGTC
TACCAAGAAGGATTATACTTTGGTGAAGATGTTAGTATTATCAAGGATGTTAATAAACCCTTGGTTCTAGAAGAACACGA
TACTGTGATTTGGGGATTACCCTTTTCGGAATCTGATGAACTGAACGTTCTTAAACAGATGAAGGCAGTATCTAGACAAG
CAGATAGTAACAAATACAATATTTTACTATTTCATGGGGAGTTACTTGAGACCTACTATTCAGGGAGTGATTTTGGAGAT
GAAGGGACTGGCAGTTATATGCCAGTAAAAAAATCTAATTTAACAGGCTTGAATTTTGATTATATCCTGGGAGGTCACTT
TCATACTAATTTCCGTCTATTTGAATTAGATAAACCTGATAAAACAAGTAATGTCCAACAAACTACCTCGGTAAACCTAG
ACCAAAACCAAAACCAAAACCAAAACCAAGGAATACAAAACAATAGAGTGCAATACTTTGTTTATCCAGGTTCTCCAGTT
TCTATAACCAACAAGGAATTAGGTAAAAGAAAAGCGAATTTGTTCAATGTGGGGGAGTCTCCCAAAGAAGAATTGCTAGA
TACATTCTATTATCATTTTGAAGAATTTAAATTAGACCCACTAAAGGATAATCACGACCCTTTGAAAGAAATTAATGACA
AGTTGTGGGCTATGGATATTGGTAATGAATCTGAATTGATTTTAAAAATTACTGGTTTTTTTGATAGTTCCAAGTTGGAA
ATCACTGAAAACAATTTGCTCACAGAAATTGAGTCTATATGTCAAAGAGTTTTAGCCGAAAAAACACATACTGACTCTGA
TTCGCTAAATTTTAGAGTCATTCCGGAATTTAAAGATATGGGAAGCATTTTGGATGATGAATTATTAAAATCTTTTCAGG
ACAAGCTCGAAGCTGTAGAGGATAACGAAGCCAAAAAAGAGAAAATGCTGCAGATGGTCATGGAGGCTTTGATGGAGGTG
AAAAATTGA

Upstream 100 bases:

>100_bases
TGTTGATAACTGTAAAATTTCGATTTAGTACTAACTCCGCCCTTAAACCTTAAACCCAAAAGGTTTCTGGGCGGTTTAAT
GTTAACAGGGGGTGAAAAAA

Downstream 100 bases:

>100_bases
AAATCAATGAAATTAATATTCAAAGGTACGGGATTTTACAGAATAAGGTTTACACCTTTAATAATGATACTAATATCTTC
TTGATATTTGGTGAAAATGA

Product: metallophosphoesterase

Products: NA

Alternate protein names: Ser/Thr Protein Phosphatase Family Protein

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MLRILHTADIHLKTGCDERWRALEELIARGQKEDIDLLIICGDLFDSSQDAVNLYNYLRSLFTNTGYRIVILPGNHDLDV
YQEGLYFGEDVSIIKDVNKPLVLEEHDTVIWGLPFSESDELNVLKQMKAVSRQADSNKYNILLFHGELLETYYSGSDFGD
EGTGSYMPVKKSNLTGLNFDYILGGHFHTNFRLFELDKPDKTSNVQQTTSVNLDQNQNQNQNQGIQNNRVQYFVYPGSPV
SITNKELGKRKANLFNVGESPKEELLDTFYYHFEEFKLDPLKDNHDPLKEINDKLWAMDIGNESELILKITGFFDSSKLE
ITENNLLTEIESICQRVLAEKTHTDSDSLNFRVIPEFKDMGSILDDELLKSFQDKLEAVEDNEAKKEKMLQMVMEALMEV
KN

Sequences:

>Translated_402_residues
MLRILHTADIHLKTGCDERWRALEELIARGQKEDIDLLIICGDLFDSSQDAVNLYNYLRSLFTNTGYRIVILPGNHDLDV
YQEGLYFGEDVSIIKDVNKPLVLEEHDTVIWGLPFSESDELNVLKQMKAVSRQADSNKYNILLFHGELLETYYSGSDFGD
EGTGSYMPVKKSNLTGLNFDYILGGHFHTNFRLFELDKPDKTSNVQQTTSVNLDQNQNQNQNQGIQNNRVQYFVYPGSPV
SITNKELGKRKANLFNVGESPKEELLDTFYYHFEEFKLDPLKDNHDPLKEINDKLWAMDIGNESELILKITGFFDSSKLE
ITENNLLTEIESICQRVLAEKTHTDSDSLNFRVIPEFKDMGSILDDELLKSFQDKLEAVEDNEAKKEKMLQMVMEALMEV
KN
>Mature_402_residues
MLRILHTADIHLKTGCDERWRALEELIARGQKEDIDLLIICGDLFDSSQDAVNLYNYLRSLFTNTGYRIVILPGNHDLDV
YQEGLYFGEDVSIIKDVNKPLVLEEHDTVIWGLPFSESDELNVLKQMKAVSRQADSNKYNILLFHGELLETYYSGSDFGD
EGTGSYMPVKKSNLTGLNFDYILGGHFHTNFRLFELDKPDKTSNVQQTTSVNLDQNQNQNQNQGIQNNRVQYFVYPGSPV
SITNKELGKRKANLFNVGESPKEELLDTFYYHFEEFKLDPLKDNHDPLKEINDKLWAMDIGNESELILKITGFFDSSKLE
ITENNLLTEIESICQRVLAEKTHTDSDSLNFRVIPEFKDMGSILDDELLKSFQDKLEAVEDNEAKKEKMLQMVMEALMEV
KN

Specific function: Sbccd Cleaves DNA Hairpin Structures. These Structures Can Inhibit DNA Replication And Are Intermediates In Certain DNA Recombination Reactions. The Complex Acts As A 3'->5' Double Strand Exonuclease That Can Open Hairpins. It Also Has A 5' Single-Strand

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46208; Mature: 46208

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRILHTADIHLKTGCDERWRALEELIARGQKEDIDLLIICGDLFDSSQDAVNLYNYLRS
CEEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
LFTNTGYRIVILPGNHDLDVYQEGLYFGEDVSIIKDVNKPLVLEEHDTVIWGLPFSESDE
HHCCCCCEEEEECCCCCHHHHHCCCCCCCCHHHHHHCCCCEEEECCCEEEEECCCCCCCH
LNVLKQMKAVSRQADSNKYNILLFHGELLETYYSGSDFGDEGTGSYMPVKKSNLTGLNFD
HHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEE
YILGGHFHTNFRLFELDKPDKTSNVQQTTSVNLDQNQNQNQNQGIQNNRVQYFVYPGSPV
EEECCEEECCEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
SITNKELGKRKANLFNVGESPKEELLDTFYYHFEEFKLDPLKDNHDPLKEINDKLWAMDI
EECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEC
GNESELILKITGFFDSSKLEITENNLLTEIESICQRVLAEKTHTDSDSLNFRVIPEFKDM
CCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHH
GSILDDELLKSFQDKLEAVEDNEAKKEKMLQMVMEALMEVKN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRILHTADIHLKTGCDERWRALEELIARGQKEDIDLLIICGDLFDSSQDAVNLYNYLRS
CEEEEEECCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHH
LFTNTGYRIVILPGNHDLDVYQEGLYFGEDVSIIKDVNKPLVLEEHDTVIWGLPFSESDE
HHCCCCCEEEEECCCCCHHHHHCCCCCCCCHHHHHHCCCCEEEECCCEEEEECCCCCCCH
LNVLKQMKAVSRQADSNKYNILLFHGELLETYYSGSDFGDEGTGSYMPVKKSNLTGLNFD
HHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCEE
YILGGHFHTNFRLFELDKPDKTSNVQQTTSVNLDQNQNQNQNQGIQNNRVQYFVYPGSPV
EEECCEEECCEEEEECCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCEEEEEECCCCC
SITNKELGKRKANLFNVGESPKEELLDTFYYHFEEFKLDPLKDNHDPLKEINDKLWAMDI
EECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEEC
GNESELILKITGFFDSSKLEITENNLLTEIESICQRVLAEKTHTDSDSLNFRVIPEFKDM
CCCCEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHH
GSILDDELLKSFQDKLEAVEDNEAKKEKMLQMVMEALMEVKN
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA