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The map label for this gene is gerKC [H]

Identifier: 188585503

GI number: 188585503

Start: 922681

End: 923859

Strand: Reverse

Name: gerKC [H]

Synonym: Nther_0875

Alternate gene names: 188585503

Gene position: 923859-922681 (Counterclockwise)

Preceding gene: 188585504

Following gene: 188585502

Centisome position: 29.18

GC content: 36.98

Gene sequence:

>1179_bases
TTGTTAAATATAAAGACAAAACTGTTTCCATCAATAATAATCATAATCTTTGTTTGTCTTTATCCGTTAATATTAACCAG
TTGCTGGAACAGGGTTGAAATGAAAGAACGAGCTTTAGTCATGGGAACAGGGATTGATTATACAGAAGACGATTTAATTG
AAATCACCACCCAGCTATTATTACCCGTTGAAAAAGGTGTCACAGGAGAAGGGGGAGGTAATGGTGAAGATGCAGTTTGG
GTTGCACAAAGCACGGGGCATACGATATTTGATGCAGTTAGAAATTATATTACCAAAACAGGCCGCAGATTATTTTTCCA
ATACAATGAAATCTTAGTTATTAGTGATGAAGTAGCCGAAGACGATATGGAAATAGTGTTAGACTTTTTTGAACGAGACC
ACGAAATCAGGTTAAATCAATTTATTCTCATAACGGAAGATAATGCTGCCGACATCTTAGAAGCCACCCACGAACAAGAA
CAGGTACCAGCAGAAGCCATAGTCGATATGGTACAAGGCCAAAATTTTTTAGGAAAAGGTGGCGAAGTTACTTTATTTGA
TTTTACAGGAGACATTCAGTCAAATGGTACCTCTCCCCACGCACCCAAAATTATTATAGAAGAGGAAGAAGACGGTGAAG
AAATACTTAAAATTGAAGGGATAGCCGTATTCGATCACTTCGATAAACTAGCTGGCTTCTTAGAACCAGATCAAGCCAGA
GGACTTAATTGGGTAGCTGGTAACCTGGATACAACTGTTTTGGTAGTTAATGAAGAAGGTGATAGTGAAAAAATAGACGG
CAAGCACAGTATTGAAGTAATACAGATAGATAGCAGCATAGATCCTGAATTTGAAAATAATTCCCCTGAGATCACAGTGA
CAGTCAATATACAAGGAAATGTTGGAGAAAAACAATCTAAAACGGAAATTCCCATCGAAGATCAAAAGAAGGCTTTAGAA
CGCCAGAGTGCTACTGTGATTGAAAATGAAATAAAATCTGCCTTTGAAAAATCTCAAGAATTAAATGCTGATATCTTTGG
TTTTGGTGATGCTCTTTACAACCACTACCCTCATCAGTGGCAAGAAATTGAAGATGAATGGCCAGAAATTTATCCAGAAT
TAACTATCAATATCGATGTTGAAGCTAATGTTAGAAGGACAGGAGTAATTAGAGATTAA

Upstream 100 bases:

>100_bases
GCCTTTTGGTCAGCGACCTAAACCCGAACAAAATAATGATTAATAATGATTAGTAAATCAAAAAACAATAAATCAATAAA
TCGATAAGGAGTTTTGTAAA

Downstream 100 bases:

>100_bases
TTCAAAAGCACTAGTAGGTGAAAAGTATGTTTTTTCAAATTGCAGGAATTATAATTGTCTCATTAATAATCTGTTTAATA
GAAGTGCCTGATATGTTAAC

Product: germination protein, Ger(x)C family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MLNIKTKLFPSIIIIIFVCLYPLILTSCWNRVEMKERALVMGTGIDYTEDDLIEITTQLLLPVEKGVTGEGGGNGEDAVW
VAQSTGHTIFDAVRNYITKTGRRLFFQYNEILVISDEVAEDDMEIVLDFFERDHEIRLNQFILITEDNAADILEATHEQE
QVPAEAIVDMVQGQNFLGKGGEVTLFDFTGDIQSNGTSPHAPKIIIEEEEDGEEILKIEGIAVFDHFDKLAGFLEPDQAR
GLNWVAGNLDTTVLVVNEEGDSEKIDGKHSIEVIQIDSSIDPEFENNSPEITVTVNIQGNVGEKQSKTEIPIEDQKKALE
RQSATVIENEIKSAFEKSQELNADIFGFGDALYNHYPHQWQEIEDEWPEIYPELTINIDVEANVRRTGVIRD

Sequences:

>Translated_392_residues
MLNIKTKLFPSIIIIIFVCLYPLILTSCWNRVEMKERALVMGTGIDYTEDDLIEITTQLLLPVEKGVTGEGGGNGEDAVW
VAQSTGHTIFDAVRNYITKTGRRLFFQYNEILVISDEVAEDDMEIVLDFFERDHEIRLNQFILITEDNAADILEATHEQE
QVPAEAIVDMVQGQNFLGKGGEVTLFDFTGDIQSNGTSPHAPKIIIEEEEDGEEILKIEGIAVFDHFDKLAGFLEPDQAR
GLNWVAGNLDTTVLVVNEEGDSEKIDGKHSIEVIQIDSSIDPEFENNSPEITVTVNIQGNVGEKQSKTEIPIEDQKKALE
RQSATVIENEIKSAFEKSQELNADIFGFGDALYNHYPHQWQEIEDEWPEIYPELTINIDVEANVRRTGVIRD
>Mature_392_residues
MLNIKTKLFPSIIIIIFVCLYPLILTSCWNRVEMKERALVMGTGIDYTEDDLIEITTQLLLPVEKGVTGEGGGNGEDAVW
VAQSTGHTIFDAVRNYITKTGRRLFFQYNEILVISDEVAEDDMEIVLDFFERDHEIRLNQFILITEDNAADILEATHEQE
QVPAEAIVDMVQGQNFLGKGGEVTLFDFTGDIQSNGTSPHAPKIIIEEEEDGEEILKIEGIAVFDHFDKLAGFLEPDQAR
GLNWVAGNLDTTVLVVNEEGDSEKIDGKHSIEVIQIDSSIDPEFENNSPEITVTVNIQGNVGEKQSKTEIPIEDQKKALE
RQSATVIENEIKSAFEKSQELNADIFGFGDALYNHYPHQWQEIEDEWPEIYPELTINIDVEANVRRTGVIRD

Specific function: Involved in the germination response to the combination of glucose, fructose, L-asparagine, and KCl [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 44115; Mature: 44115

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIKTKLFPSIIIIIFVCLYPLILTSCWNRVEMKERALVMGTGIDYTEDDLIEITTQLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHH
LPVEKGVTGEGGGNGEDAVWVAQSTGHTIFDAVRNYITKTGRRLFFQYNEILVISDEVAE
HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECEEEEEECCCCC
DDMEIVLDFFERDHEIRLNQFILITEDNAADILEATHEQEQVPAEAIVDMVQGQNFLGKG
CHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
GEVTLFDFTGDIQSNGTSPHAPKIIIEEEEDGEEILKIEGIAVFDHFDKLAGFLEPDQAR
CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECEEEEHHHHHHHCCCCCHHHC
GLNWVAGNLDTTVLVVNEEGDSEKIDGKHSIEVIQIDSSIDPEFENNSPEITVTVNIQGN
CCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECC
VGEKQSKTEIPIEDQKKALERQSATVIENEIKSAFEKSQELNADIFGFGDALYNHYPHQW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCHHH
QEIEDEWPEIYPELTINIDVEANVRRTGVIRD
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MLNIKTKLFPSIIIIIFVCLYPLILTSCWNRVEMKERALVMGTGIDYTEDDLIEITTQLL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHHH
LPVEKGVTGEGGGNGEDAVWVAQSTGHTIFDAVRNYITKTGRRLFFQYNEILVISDEVAE
HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECEEEEEECCCCC
DDMEIVLDFFERDHEIRLNQFILITEDNAADILEATHEQEQVPAEAIVDMVQGQNFLGKG
CHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
GEVTLFDFTGDIQSNGTSPHAPKIIIEEEEDGEEILKIEGIAVFDHFDKLAGFLEPDQAR
CCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEEECEEEEHHHHHHHCCCCCHHHC
GLNWVAGNLDTTVLVVNEEGDSEKIDGKHSIEVIQIDSSIDPEFENNSPEITVTVNIQGN
CCEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEECC
VGEKQSKTEIPIEDQKKALERQSATVIENEIKSAFEKSQELNADIFGFGDALYNHYPHQW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHCCCHHH
QEIEDEWPEIYPELTINIDVEANVRRTGVIRD
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]