| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585463
Identifier: 188585463
GI number: 188585463
Start: 874988
End: 876418
Strand: Direct
Name: 188585463
Synonym: Nther_0835
Alternate gene names: NA
Gene position: 874988-876418 (Clockwise)
Preceding gene: 188585462
Following gene: 188585468
Centisome position: 27.64
GC content: 39.34
Gene sequence:
>1431_bases ATGAAAAGATTTAGTATTCTTTTGCTATCATTGATGCTAATTATGGGAGGACTTTTTGTAGCAGGCTGTGAAACAGAAGA GGACGTAGCAAAAGAAGATGATGAGGTTGCAGAAGAAGAAAAGGATGAGAAAGAAAAGGATCAAGATGAAACTGTTGATG AAGAAGAATTAGATGAATTCATGGAAGACGCGGACTTTGAAGACGGCACATATCGAGGTATATTCGCCGATAGAGGAGAC ATTCATGTTGGCTTACAGTTTACCTTAGAAGACAACAAAATAACTGAAATTAGCCATAGGCACATGTATTACGATGGTAT AGACTATTTAGATGAAGATATTGATGAAACTTACAAAGGAATCAGAGATCAGCATAAGCAGGCAGTAGAACATTTAGAAG GTAAAGATGTACGAGAAGCTGTGGCAGACTTATATGAGCCCGGTGACTTTGTGGACGATGTAGATAGCTTTTCAGGAGCG ACTATTTATTCTCAGAAGGAAGTTTCCGCCATTGTAGATGGCTTGAACCGAGGAGTATATAGATTCAGAGAAGTAGGTGG CGAAGTGCCGGAGGATTATAGCCCTATTTCTGAAGATGCAGATTTTGAAGATGGAACATATCGAGGTATTTTTGCCGATA GAGGAGACATTCATGTTGGCTTACAGTTTACCTTAGAAGATAATAAAATAACTGAAATTAGCCATAGGCACATGTATTAC GATGGTATAGACTATTTAGATGAAGATATTGATGAAACTTACAAAGGAATCAGAGATCAGCACAAGCAGGCAGTAGAACA TTTAGAAGGTAAAGATGTACGAGAAGCTGTATCAGACTTATATGAGCCCGGTAACTTTGTGGATGATGTAGATAGCTTTT CAGGAGCGACTATTTATTCCCAGAAGGAAGTTTCCGCCATTGTAGATGGCTTGAACCGAGGAGTATATAGATTCAGAGAA GTAGGTGGCGAGGTACCGGAGGATTATAGCCCTATTTCTGAAGATGCAGATTTTGAAGATGGAACATATCGAGGTATTTT TGCCGATAGAGGAGACATTCATGTAGTTTTACAGTTTACTTTAGAAGATAACGAAATAACTGAAATAGGACATAGATACA TGTATTATGATGGTGTAGATTATTTAGACGAAGATATTGATGAAACTTACAAAGGAATCAGAGATCAGCACAAGCAGGCA GTAGAACATTTAGAAGGTAAAGATGTACGAGAAGCTGTGGCAGACTTATATGAGCCCGGTGACTTTGTGGACGATGTAGA TAGCTTTTCAGGAGCGACTATTTATTCTCAGAAGGAAGTTTCCGCCATTGTAGATGGTCTAAACCGAGGAGTATACAGAT TCAGAGAAGTAGGTGGCGAAGTGCCGGAGGATTATAGTCCTCTAAGAACTAGGCCACAGACTCAGCAGTAA
Upstream 100 bases:
>100_bases ACCCCTAATATCTGGAATTTATTGACCAATAAAAAGTTTTTATGATATGCTTGTACATATGATATCAATCACAAAAAAAG ATTTAGGGGGGGGACGAACT
Downstream 100 bases:
>100_bases TCATTTAAAAATTTATTGATAGCAAAAGCCCGTGCATATAGCACGGGCTTTTTTGCATGGTGTTTAATTAAATTACTATA GTAGATTAAAATTCTCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEFMEDADFEDGTYRGIFADRGD IHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGA TIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFRE VGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFTLEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQA VEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ
Sequences:
>Translated_476_residues MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEFMEDADFEDGTYRGIFADRGD IHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGA TIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFRE VGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFTLEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQA VEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ >Mature_476_residues MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEFMEDADFEDGTYRGIFADRGD IHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGA TIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFRE VGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFTLEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQA VEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54362; Mature: 54362
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEF CCHHHHHHHHHHHHHCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKG HHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEECCHHHHHHHHHHHHHH IRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVY HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH RFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEE DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEC QKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEE LEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPG ECCCHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC DFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ CHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRFSILLLSLMLIMGGLFVAGCETEEDVAKEDDEVAEEEKDEKEKDQDETVDEEELDEF CCHHHHHHHHHHHHHCCCEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH MEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYYDGIDYLDEDIDETYKG HHHCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEECCHHHHHHHHHHHHHH IRDQHKQAVEHLEGKDVREAVADLYEPGDFVDDVDSFSGATIYSQKEVSAIVDGLNRGVY HHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHH RFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVGLQFTLEDNKITEISHRHMYY HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHEE DGIDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVSDLYEPGNFVDDVDSFSGATIYS CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHCCCCCEEEC QKEVSAIVDGLNRGVYRFREVGGEVPEDYSPISEDADFEDGTYRGIFADRGDIHVVLQFT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEE LEDNEITEIGHRYMYYDGVDYLDEDIDETYKGIRDQHKQAVEHLEGKDVREAVADLYEPG ECCCHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC DFVDDVDSFSGATIYSQKEVSAIVDGLNRGVYRFREVGGEVPEDYSPLRTRPQTQQ CHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA