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The map label for this gene is ysdA [H]

Identifier: 188585334

GI number: 188585334

Start: 725907

End: 726215

Strand: Direct

Name: ysdA [H]

Synonym: Nther_0699

Alternate gene names: 188585334

Gene position: 725907-726215 (Clockwise)

Preceding gene: 188585333

Following gene: 188585335

Centisome position: 22.93

GC content: 30.74

Gene sequence:

>309_bases
ATGGAATTAATTGTTCAATGGACTAGCTCGGAATTCATATACTTATTATTAACTTTACTAAATATTTATGCTTTTGTTCT
TATGGGACTTGATAAACATTTTGCAATAAAAGGGAAAAGCAGGATTTCAGAAAAGCATTTATTGGGATCTGGAGTTGTAG
GAGGGGTGTTTGGACTCTATGTTGGGATGAAAGTTTTTAGACATAAGACTCAACATTTAATATTTAAACTTGGAATTCCA
CTACTTTTATTTTTATATGTTGTGGTATTTTATTTTACGATAAACATTCCAGAAAGCCCACTGCTTTAG

Upstream 100 bases:

>100_bases
GACTTAATGGGTGCCCTTTTATTATGTTAAAATTCAGTTATGCTTATTAACCAAATCTTTTTAACCACATTAAACGTCTA
ATGATTTGAGGAGGTTAACT

Downstream 100 bases:

>100_bases
GTGTAGGAGTATTTTAATTCAAAAGGGGTGACCATCTTGATGAATGTATAGTGATTAATAGAATTACTTAGCGGAGAGGA
GTGTATTTAATGGCTATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MELIVQWTSSEFIYLLLTLLNIYAFVLMGLDKHFAIKGKSRISEKHLLGSGVVGGVFGLYVGMKVFRHKTQHLIFKLGIP
LLLFLYVVVFYFTINIPESPLL

Sequences:

>Translated_102_residues
MELIVQWTSSEFIYLLLTLLNIYAFVLMGLDKHFAIKGKSRISEKHLLGSGVVGGVFGLYVGMKVFRHKTQHLIFKLGIP
LLLFLYVVVFYFTINIPESPLL
>Mature_102_residues
MELIVQWTSSEFIYLLLTLLNIYAFVLMGLDKHFAIKGKSRISEKHLLGSGVVGGVFGLYVGMKVFRHKTQHLIFKLGIP
LLLFLYVVVFYFTINIPESPLL

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 11646; Mature: 11646

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIVQWTSSEFIYLLLTLLNIYAFVLMGLDKHFAIKGKSRISEKHLLGSGVVGGVFGLY
CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHH
VGMKVFRHKTQHLIFKLGIPLLLFLYVVVFYFTINIPESPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MELIVQWTSSEFIYLLLTLLNIYAFVLMGLDKHFAIKGKSRISEKHLLGSGVVGGVFGLY
CCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHCCCHHHHHHHHH
VGMKVFRHKTQHLIFKLGIPLLLFLYVVVFYFTINIPESPLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]