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The map label for this gene is yfcE [H]

Identifier: 188585279

GI number: 188585279

Start: 663794

End: 664351

Strand: Direct

Name: yfcE [H]

Synonym: Nther_0641

Alternate gene names: 188585279

Gene position: 663794-664351 (Clockwise)

Preceding gene: 188585278

Following gene: 188585280

Centisome position: 20.97

GC content: 36.74

Gene sequence:

>558_bases
ATGCGGATAGGATTAATCAGTGATACTCATGGCAGTTTAAAAGCCTGGAATCAAGCTATGGAACTATTTCAAGATTGTCA
GGTAATTTTACACGGAGGAGATATTTTATACCATGGTCCTCGAAATCCTTTACCAGAAGGGTACGATCCTAAGGAATTGG
CCAATGAATTAAATAATTTAGGTAAGAGTTTATTTATGGTCGGCGGAAATTGTGATGCAGAAGTTGATAACATGGTACTT
AACCATCCTGTATTAACTCCCTATTTTTATACCAGTCTCGAAGGACTTAACATCTTAGTTTTGCATGGTCATAAATATAG
TCAAGAAGAGCTATTTCAACTGGGTAAAAGATACCAAGCTGACATGATCATGGTAGGCCATACTCATATACCACAAATCA
AACACCAAGATGATTTAATCTTAATTAACCCTGGTTCCCCGTCTTTACCCAAGGGTGAAGACAAAGTTCCTGCTGTTGGT
ATTTTAGATACAACCGAGAAAACAGTGGAGATCAAGGACCTTAGAAATACTAATACTTTAATATCAAGTAGTTGGTAA

Upstream 100 bases:

>100_bases
TACTGATGTTATTGAGGTTACGGAGAATAACAGGGATGACTTACCAGAAAAGTTAGCAAAACGTATAGAAGAGCAATTAT
AAAATCTAGGAGGTGTTTTT

Downstream 100 bases:

>100_bases
CAGGTTCTGACCGTATTGTATAATGAGAAGCGAAGAAAGTAACTATTACAAGGGCATAGTAATTACTACAGGAGTGGTGA
TGGGCGTGAGTACTAATAGT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRIGLISDTHGSLKAWNQAMELFQDCQVILHGGDILYHGPRNPLPEGYDPKELANELNNLGKSLFMVGGNCDAEVDNMVL
NHPVLTPYFYTSLEGLNILVLHGHKYSQEELFQLGKRYQADMIMVGHTHIPQIKHQDDLILINPGSPSLPKGEDKVPAVG
ILDTTEKTVEIKDLRNTNTLISSSW

Sequences:

>Translated_185_residues
MRIGLISDTHGSLKAWNQAMELFQDCQVILHGGDILYHGPRNPLPEGYDPKELANELNNLGKSLFMVGGNCDAEVDNMVL
NHPVLTPYFYTSLEGLNILVLHGHKYSQEELFQLGKRYQADMIMVGHTHIPQIKHQDDLILINPGSPSLPKGEDKVPAVG
ILDTTEKTVEIKDLRNTNTLISSSW
>Mature_185_residues
MRIGLISDTHGSLKAWNQAMELFQDCQVILHGGDILYHGPRNPLPEGYDPKELANELNNLGKSLFMVGGNCDAEVDNMVL
NHPVLTPYFYTSLEGLNILVLHGHKYSQEELFQLGKRYQADMIMVGHTHIPQIKHQDDLILINPGSPSLPKGEDKVPAVG
ILDTTEKTVEIKDLRNTNTLISSSW

Specific function: Shows phosphodiesterase activity [H]

COG id: COG0622

COG function: function code R; Predicted phosphoesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily. YfcE family [H]

Homologues:

Organism=Escherichia coli, GI1788638, Length=171, Percent_Identity=39.766081871345, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR020935
- InterPro:   IPR000979 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 20655; Mature: 20655

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGLISDTHGSLKAWNQAMELFQDCQVILHGGDILYHGPRNPLPEGYDPKELANELNNL
CEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHH
GKSLFMVGGNCDAEVDNMVLNHPVLTPYFYTSLEGLNILVLHGHKYSQEELFQLGKRYQA
CCEEEEECCCCCCCHHHEEECCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
DMIMVGHTHIPQIKHQDDLILINPGSPSLPKGEDKVPAVGILDTTEKTVEIKDLRNTNTL
CEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCE
ISSSW
EECCC
>Mature Secondary Structure
MRIGLISDTHGSLKAWNQAMELFQDCQVILHGGDILYHGPRNPLPEGYDPKELANELNNL
CEEEEECCCCCHHHHHHHHHHHHHHHEEEEECCEEEEECCCCCCCCCCCHHHHHHHHHHH
GKSLFMVGGNCDAEVDNMVLNHPVLTPYFYTSLEGLNILVLHGHKYSQEELFQLGKRYQA
CCEEEEECCCCCCCHHHEEECCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCC
DMIMVGHTHIPQIKHQDDLILINPGSPSLPKGEDKVPAVGILDTTEKTVEIKDLRNTNTL
CEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCE
ISSSW
EECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]