Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188585221

Identifier: 188585221

GI number: 188585221

Start: 610423

End: 610908

Strand: Direct

Name: 188585221

Synonym: Nther_0583

Alternate gene names: NA

Gene position: 610423-610908 (Clockwise)

Preceding gene: 188585220

Following gene: 188585222

Centisome position: 19.28

GC content: 36.42

Gene sequence:

>486_bases
ATGAAAAAGGAATTAGAACTATTGAAACAGGCTGCCATTAACGAACAAGAGGGATATGAATTTTATATGATGGCCGCCCA
AAACTCTGATAATCAGGAGTCTCAAGAGGCTTTGAATGAACTTGCTCAGGAAGAAAAGCAACATAAAGAATGGATCCTTG
AATTATATGAAAAATTCGAACAAGGAAGTGCAGATAGCTTTGATTTTGATCAGGTGACTGCCCCTTCACCTGAACTGTTT
AGATGGGAAAATCTACCATTAGACAATACTTCCAAGGCTTTGTCTGTTTTTAGTATCGGTGTTAAAATGGAATACGCCGC
AGTAGAGTTTTACAAAGATGCAAAGGAAAAAACCGATGATCCTAATGTTGAAAAATTGCTTGATATTTTAATTGATTGGG
AAAGACAGCATTTAAATGACTTTCAAAAGCGATACGATGAACTGCAAAAAGAATGGTGGGACGAACAGAGATTTAGTCCT
TCATAA

Upstream 100 bases:

>100_bases
AATATTGATTATAATTGCTATAAATATTTTCTTGAAATAATAACAATTATTAGTTATACTGGAAAAAACAGAAACCTTAA
CAAGGAGGAGAATATTTCCT

Downstream 100 bases:

>100_bases
CAAGCTATAACCGGCCATTTGGGTGAATAACCCAAGGGCCGGTTTTTTATTGTGCGCCATGCATGACGATTAGCTAGGTG
GTGTAAGTCCACTATGGGGG

Product: Rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MKKELELLKQAAINEQEGYEFYMMAAQNSDNQESQEALNELAQEEKQHKEWILELYEKFEQGSADSFDFDQVTAPSPELF
RWENLPLDNTSKALSVFSIGVKMEYAAVEFYKDAKEKTDDPNVEKLLDILIDWERQHLNDFQKRYDELQKEWWDEQRFSP
S

Sequences:

>Translated_161_residues
MKKELELLKQAAINEQEGYEFYMMAAQNSDNQESQEALNELAQEEKQHKEWILELYEKFEQGSADSFDFDQVTAPSPELF
RWENLPLDNTSKALSVFSIGVKMEYAAVEFYKDAKEKTDDPNVEKLLDILIDWERQHLNDFQKRYDELQKEWWDEQRFSP
S
>Mature_161_residues
MKKELELLKQAAINEQEGYEFYMMAAQNSDNQESQEALNELAQEEKQHKEWILELYEKFEQGSADSFDFDQVTAPSPELF
RWENLPLDNTSKALSVFSIGVKMEYAAVEFYKDAKEKTDDPNVEKLLDILIDWERQHLNDFQKRYDELQKEWWDEQRFSP
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19200; Mature: 19200

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKELELLKQAAINEQEGYEFYMMAAQNSDNQESQEALNELAQEEKQHKEWILELYEKFE
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGSADSFDFDQVTAPSPELFRWENLPLDNTSKALSVFSIGVKMEYAAVEFYKDAKEKTDD
CCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNVEKLLDILIDWERQHLNDFQKRYDELQKEWWDEQRFSPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKKELELLKQAAINEQEGYEFYMMAAQNSDNQESQEALNELAQEEKQHKEWILELYEKFE
CCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QGSADSFDFDQVTAPSPELFRWENLPLDNTSKALSVFSIGVKMEYAAVEFYKDAKEKTDD
CCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PNVEKLLDILIDWERQHLNDFQKRYDELQKEWWDEQRFSPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA