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The map label for this gene is glgC [H]

Identifier: 188585200

GI number: 188585200

Start: 588627

End: 589796

Strand: Reverse

Name: glgC [H]

Synonym: Nther_0561

Alternate gene names: 188585200

Gene position: 589796-588627 (Counterclockwise)

Preceding gene: 188585201

Following gene: 188585199

Centisome position: 18.63

GC content: 37.18

Gene sequence:

>1170_bases
ATGATTAATAATGGTCAAGATTGGGTCGCCATGATTTTAGCTGGTGGTAAAGGGTCGAGATTAAATGAACTCACTTCCGA
GACGGCTAAACCCGCCGTCCTTTTTGGCGGAAAATACAGAATAATCGATTTCACCTTAAGCAATTGTAGAAATTCTGGTG
TTAACACGGTAGGTGTATTAATTCAATACAAACCCTTTGAACTAAATACTCATATCGGTGAGGGAAGGAGTTGGGACCTT
CATGGTACGTGGAGCGGAGTTTATATATTACCACCCTATACAGAAAAAAACGGGGTATGCTGGTATAAAGGGACCGCAGA
TTCTGTCTATCAGAACCTGGAGTTTCTATCGACTTACAATCCTAAATACGTGTTAATTTTGTCAGGTGACCATATCTATA
AAATGGATTATCAAAAAATGCTACAATTTCACATTGCTTCTCAAGCTTCTGTGACTATTTCTGTAATGGAAGTCCCTTAC
AGCGAAGCTCATCGTTTTGGAATTATGAATACAGATAATAAAGGGAAGATCTTCGAATTTGAAGAAAAACCCCAACAACC
CAAAAATAATTTAGCTTCCATGGGGATCTACATTTTTAATTATGACAAACTAAAAGAGTATTTAGAAAAAGATAGCCAAA
ATCCCACCTCAACAAGAGATTTTGGTAAAGATATTATCCCTCAAATGCTAGCTAATGAGGAAAGATTATGTTCTTATATT
TATCAAGGTTATTGGAGAGATGTGGGAACTGTAAAAAGTTTTTATGATGCCAACATGGACCTATTGTCCAGTAAACCCTT
TTTAAAACTTGATTGCCAAGAATGGCCAATTCTCTCCAGAAGCAGCTCTTACCCACCACAATACATTAGTGAAACTGCAA
AGGTTCGCAATTCTATTATCAGTGAAGGTTGTCACCTGGAAGGCACTGTAGAAAATTCTGTACTATCTCCGGGAGTGACT
ATCAAAAAAAATGCTGTGGTTGAAAATTCCGTACTTCTGGAAAACACCATTGTAGAACAAAACGCCACTATCAAACATGC
CATCACATGTCAAAATTGCCATATCAAATCTTTTGCCTCGATAAATCAAGAAAACCATCAAGAACCAGTACTGGTACCCC
AAAATACAACAATTACACAAGAAACGAAATTAGAAGAGGTGTTAACATGA

Upstream 100 bases:

>100_bases
GAGGTTGAATGGCATCATCGCCCGTATTCCATTGAACTTAATATCCCTCCCCTGGCCACCTTTATTTTAAAACCTTTGGC
AGCTAGAGAGGAGAATTAGA

Downstream 100 bases:

>100_bases
AAGATTTAATGGGCATAATTTATTTGAACAAACCAGAACAAGATGGAAAATTACCGATTTTAACTCGAAATCGGTGTATT
GCCTCTTTACCAATTTGGAG

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MINNGQDWVAMILAGGKGSRLNELTSETAKPAVLFGGKYRIIDFTLSNCRNSGVNTVGVLIQYKPFELNTHIGEGRSWDL
HGTWSGVYILPPYTEKNGVCWYKGTADSVYQNLEFLSTYNPKYVLILSGDHIYKMDYQKMLQFHIASQASVTISVMEVPY
SEAHRFGIMNTDNKGKIFEFEEKPQQPKNNLASMGIYIFNYDKLKEYLEKDSQNPTSTRDFGKDIIPQMLANEERLCSYI
YQGYWRDVGTVKSFYDANMDLLSSKPFLKLDCQEWPILSRSSSYPPQYISETAKVRNSIISEGCHLEGTVENSVLSPGVT
IKKNAVVENSVLLENTIVEQNATIKHAITCQNCHIKSFASINQENHQEPVLVPQNTTITQETKLEEVLT

Sequences:

>Translated_389_residues
MINNGQDWVAMILAGGKGSRLNELTSETAKPAVLFGGKYRIIDFTLSNCRNSGVNTVGVLIQYKPFELNTHIGEGRSWDL
HGTWSGVYILPPYTEKNGVCWYKGTADSVYQNLEFLSTYNPKYVLILSGDHIYKMDYQKMLQFHIASQASVTISVMEVPY
SEAHRFGIMNTDNKGKIFEFEEKPQQPKNNLASMGIYIFNYDKLKEYLEKDSQNPTSTRDFGKDIIPQMLANEERLCSYI
YQGYWRDVGTVKSFYDANMDLLSSKPFLKLDCQEWPILSRSSSYPPQYISETAKVRNSIISEGCHLEGTVENSVLSPGVT
IKKNAVVENSVLLENTIVEQNATIKHAITCQNCHIKSFASINQENHQEPVLVPQNTTITQETKLEEVLT
>Mature_389_residues
MINNGQDWVAMILAGGKGSRLNELTSETAKPAVLFGGKYRIIDFTLSNCRNSGVNTVGVLIQYKPFELNTHIGEGRSWDL
HGTWSGVYILPPYTEKNGVCWYKGTADSVYQNLEFLSTYNPKYVLILSGDHIYKMDYQKMLQFHIASQASVTISVMEVPY
SEAHRFGIMNTDNKGKIFEFEEKPQQPKNNLASMGIYIFNYDKLKEYLEKDSQNPTSTRDFGKDIIPQMLANEERLCSYI
YQGYWRDVGTVKSFYDANMDLLSSKPFLKLDCQEWPILSRSSSYPPQYISETAKVRNSIISEGCHLEGTVENSVLSPGVT
IKKNAVVENSVLLENTIVEQNATIKHAITCQNCHIKSFASINQENHQEPVLVPQNTTITQETKLEEVLT

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI11761619, Length=392, Percent_Identity=26.0204081632653, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI11761621, Length=367, Percent_Identity=26.158038147139, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1789837, Length=386, Percent_Identity=40.4145077720207, Blast_Score=275, Evalue=3e-75,
Organism=Escherichia coli, GI1788351, Length=272, Percent_Identity=25.3676470588235, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI133931050, Length=359, Percent_Identity=28.4122562674095, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320148, Length=352, Percent_Identity=25, Blast_Score=84, Evalue=5e-17,
Organism=Drosophila melanogaster, GI21355443, Length=337, Percent_Identity=27.0029673590504, Blast_Score=92, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24644084, Length=337, Percent_Identity=27.0029673590504, Blast_Score=92, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 44054; Mature: 44054

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNGQDWVAMILAGGKGSRLNELTSETAKPAVLFGGKYRIIDFTLSNCRNSGVNTVGVL
CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCEEEEEEEEEHHCCCCCCCEEEEE
IQYKPFELNTHIGEGRSWDLHGTWSGVYILPPYTEKNGVCWYKGTADSVYQNLEFLSTYN
EEEECEEEECCCCCCCEEEECCCCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHCCCC
PKYVLILSGDHIYKMDYQKMLQFHIASQASVTISVMEVPYSEAHRFGIMNTDNKGKIFEF
CCEEEEECCCEEEEHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCEEEE
EEKPQQPKNNLASMGIYIFNYDKLKEYLEKDSQNPTSTRDFGKDIIPQMLANEERLCSYI
CCCCCCCHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
YQGYWRDVGTVKSFYDANMDLLSSKPFLKLDCQEWPILSRSSSYPPQYISETAKVRNSII
HHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SEGCHLEGTVENSVLSPGVTIKKNAVVENSVLLENTIVEQNATIKHAITCQNCHIKSFAS
HCCCCEEECCCCCCCCCCCEEECCCEECCCEEEEHEEECCCCCEEEEEEECCCCCHHHHH
INQENHQEPVLVPQNTTITQETKLEEVLT
CCCCCCCCCEEECCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MINNGQDWVAMILAGGKGSRLNELTSETAKPAVLFGGKYRIIDFTLSNCRNSGVNTVGVL
CCCCCCCEEEEEEECCCCCHHHHHHHHHCCCEEEECCEEEEEEEEEHHCCCCCCCEEEEE
IQYKPFELNTHIGEGRSWDLHGTWSGVYILPPYTEKNGVCWYKGTADSVYQNLEFLSTYN
EEEECEEEECCCCCCCEEEECCCCCCEEEECCCCCCCCEEEECCCHHHHHHHHHHHCCCC
PKYVLILSGDHIYKMDYQKMLQFHIASQASVTISVMEVPYSEAHRFGIMNTDNKGKIFEF
CCEEEEECCCEEEEHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCEEEE
EEKPQQPKNNLASMGIYIFNYDKLKEYLEKDSQNPTSTRDFGKDIIPQMLANEERLCSYI
CCCCCCCHHHHHHCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
YQGYWRDVGTVKSFYDANMDLLSSKPFLKLDCQEWPILSRSSSYPPQYISETAKVRNSII
HHHHHHHHHHHHHHHHCCCHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
SEGCHLEGTVENSVLSPGVTIKKNAVVENSVLLENTIVEQNATIKHAITCQNCHIKSFAS
HCCCCEEECCCCCCCCCCCEEECCCEECCCEEEEHEEECCCCCEEEEEEECCCCCHHHHH
INQENHQEPVLVPQNTTITQETKLEEVLT
CCCCCCCCCEEECCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9244254 [H]