| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188585082
Identifier: 188585082
GI number: 188585082
Start: 466470
End: 467291
Strand: Direct
Name: 188585082
Synonym: Nther_0443
Alternate gene names: NA
Gene position: 466470-467291 (Clockwise)
Preceding gene: 188585081
Following gene: 188585083
Centisome position: 14.74
GC content: 36.25
Gene sequence:
>822_bases ATGACTCGAATTGAATTAGCTATGTTTTTATTAATTACCTTAGTTTTTATGAGTGTTCTAACTGCTTGTCAACAAAATGA GGATAAAGATTTGATTATGGCAACTACTACAAGCGTCTATGACTCTAACTTAATAGAGACTTTAATGGATGAATACTATG AGCAAGAAGGAGTAAAGGTTCAGATTACAGCTAGAGGAACTGGTGCTTCTTTGGATTTAGGGAAACGGGGTGATGTAGAT CTCGTGCTGGTTCATGACCCGAAACAGGAAATTGAAATGCTTGAACAAGGGTATTTTATTGAGAGACATGAGTTAATGGA AAATGACTTTATAATTGTAGGCCCAGCAAATGACCCTGCGGGAATTAGTGAAGTAAAGGAGGTAGATGAAGCTTTACAAG CCATCATAGAATCTGAACAAGAGTTTATCTCGCGTGGGGATGATTCAGGGACCCATAGAAGGGAACGCCAGTTATTTGAG GACTTAGGTGAATTTCCTGAAGAAGATAAGTATTTATCCGTTGGGCAAGGGATGGGTGAAACTTTGAGAACTGCTGAAGA AAAGCAAGCCTATACCCTGTCAGATAATGCAACCTATACATCTTTACAAGCAAGTAATGAGAATTTCGAGCTAGAAGTGT TATATGAGGGAAATGGTAAACTAGAAAATATTTATAGTATACTTATACCGCAAATTGATGATTTACCTGAAACTAGAACA GAAAAAATTGAAAATCTAGTAGAATTTTTATTGTCAGAAGAGGGGGAAAAGATTATTTCTCAATACCAAAAAAATAATAA TGTCTTATTCCGTCCCAAGTAG
Upstream 100 bases:
>100_bases TGGCTCGGTCATTGCGAACCCTCATTACTTAATATGGACACATTTTAAGTAATTATACAAATTTTTAATAAAAAAATTTA AAAAGTTGGGTGAATCTACT
Downstream 100 bases:
>100_bases CAGTTTGTGGAAGCTATATCTAATATAACTAAAACAAATACTGGTAATATGGATACAGCTTTCCTTAGTTGATTACAAAG TCTTTTAACTAAAATTAGTC
Product: molybdate-binding protein
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; ABC-Type Transport System Permease Component; TUNGstate ABC Transporter Permease-Like Protein; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Signal Peptide; TUNGstate Abc Transporter Permease; ABC TUNGstate Transporter Permease Component; ABC-Type Transport Protein Permease Component; ABC Transporter; Periplasmic Protein; Molybdate Or TUNGstate Transport; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MTRIELAMFLLITLVFMSVLTACQQNEDKDLIMATTTSVYDSNLIETLMDEYYEQEGVKVQITARGTGASLDLGKRGDVD LVLVHDPKQEIEMLEQGYFIERHELMENDFIIVGPANDPAGISEVKEVDEALQAIIESEQEFISRGDDSGTHRRERQLFE DLGEFPEEDKYLSVGQGMGETLRTAEEKQAYTLSDNATYTSLQASNENFELEVLYEGNGKLENIYSILIPQIDDLPETRT EKIENLVEFLLSEEGEKIISQYQKNNNVLFRPK
Sequences:
>Translated_273_residues MTRIELAMFLLITLVFMSVLTACQQNEDKDLIMATTTSVYDSNLIETLMDEYYEQEGVKVQITARGTGASLDLGKRGDVD LVLVHDPKQEIEMLEQGYFIERHELMENDFIIVGPANDPAGISEVKEVDEALQAIIESEQEFISRGDDSGTHRRERQLFE DLGEFPEEDKYLSVGQGMGETLRTAEEKQAYTLSDNATYTSLQASNENFELEVLYEGNGKLENIYSILIPQIDDLPETRT EKIENLVEFLLSEEGEKIISQYQKNNNVLFRPK >Mature_272_residues TRIELAMFLLITLVFMSVLTACQQNEDKDLIMATTTSVYDSNLIETLMDEYYEQEGVKVQITARGTGASLDLGKRGDVDL VLVHDPKQEIEMLEQGYFIERHELMENDFIIVGPANDPAGISEVKEVDEALQAIIESEQEFISRGDDSGTHRRERQLFED LGEFPEEDKYLSVGQGMGETLRTAEEKQAYTLSDNATYTSLQASNENFELEVLYEGNGKLENIYSILIPQIDDLPETRTE KIENLVEFLLSEEGEKIISQYQKNNNVLFRPK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31069; Mature: 30938
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRIELAMFLLITLVFMSVLTACQQNEDKDLIMATTTSVYDSNLIETLMDEYYEQEGVKV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEE QITARGTGASLDLGKRGDVDLVLVHDPKQEIEMLEQGYFIERHELMENDFIIVGPANDPA EEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCC GISEVKEVDEALQAIIESEQEFISRGDDSGTHRRERQLFEDLGEFPEEDKYLSVGQGMGE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCH TLRTAEEKQAYTLSDNATYTSLQASNENFELEVLYEGNGKLENIYSILIPQIDDLPETRT HHHHHHHHCCEEECCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHH EKIENLVEFLLSEEGEKIISQYQKNNNVLFRPK HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC >Mature Secondary Structure TRIELAMFLLITLVFMSVLTACQQNEDKDLIMATTTSVYDSNLIETLMDEYYEQEGVKV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCEE QITARGTGASLDLGKRGDVDLVLVHDPKQEIEMLEQGYFIERHELMENDFIIVGPANDPA EEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCC GISEVKEVDEALQAIIESEQEFISRGDDSGTHRRERQLFEDLGEFPEEDKYLSVGQGMGE CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCH TLRTAEEKQAYTLSDNATYTSLQASNENFELEVLYEGNGKLENIYSILIPQIDDLPETRT HHHHHHHHCCEEECCCCEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHH EKIENLVEFLLSEEGEKIISQYQKNNNVLFRPK HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA