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The map label for this gene is 188585081

Identifier: 188585081

GI number: 188585081

Start: 465218

End: 466003

Strand: Direct

Name: 188585081

Synonym: Nther_0442

Alternate gene names: NA

Gene position: 465218-466003 (Clockwise)

Preceding gene: 188585080

Following gene: 188585082

Centisome position: 14.7

GC content: 31.3

Gene sequence:

>786_bases
ATGGAAATCATTGATTTTAAACAAAGTAATCTGAATCGGGTTTACAAATATAATGAGGAGTTAAAAAAAACACAAAGTAA
CTTCAAGCAGTTAAAAAGTAGACTTTTAAAGAAACAACTGTTAAAAATAATAACTTTTAACAAATCAAAAAAGCGACAAA
TACAAGAGAATATATGCTATGATAAAACTGAACTGGACAAGCTTGAACAGCAAATATTTAGACTTACAGAAAAGATAACA
GCTCTTGAAAAGGGTGTAGCAGGTGAAAAATTAGTAAGAGAACATCTTAAGGAGCAATTATCTGACAGCTATTACTTAAT
AAATAACTTTTATTTTTTTAATAATTCGCCCTGTGAAATAGATCATATTATTGTTGGTCCAGCGGGTTTTGTGATAGTTG
AGACAAAACATTTGGGAGGAAAACTATTTGTTCATCCTTGTCATTATAAATGGTTGCGGGCACCTTTGAATAACCCTGAT
GCTATTAAAAAACCTATGAAAAATCCATTAAAACAATTGGAGAGAAATGTGGCGGAGTTTAAGAGTTTATTATCAGAAGC
CGAAATGGGAGAACTACCCGTGCAAGGGGTCTTGGTCTTTCCAAGAAACAGTTGTTTGCTGTCAAATCGAGGATGTGGTG
AAGAATTTCCTGTATTATATCATGATGAATTAATAGAGTATATCGATAGTTTAGAAAAATTAGACCATTTAAGTGATATC
AGCAGGCTAAATTGTTTGGTTGACAACTTAATTGATTTAGCTAATCAAAAAAATAAACGAACATAA

Upstream 100 bases:

>100_bases
GCGGGAATCTAAACAGATACATCCTAATACTTCTCTGGCTGTAGAAGGAACGTCATATTTAGTATGATTTTCTGTCCATT
TTTTCTGGGGAAGTGATTTT

Downstream 100 bases:

>100_bases
AAAAGAGCCCACAATGACCTGCGGTCGGGCCAGTGTAGATTCTATGTTAGCCCTGTGCAACCTCTCGGGTACACAGGACC
ATGTCAGAACCTACACTAGC

Product: NERD domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MEIIDFKQSNLNRVYKYNEELKKTQSNFKQLKSRLLKKQLLKIITFNKSKKRQIQENICYDKTELDKLEQQIFRLTEKIT
ALEKGVAGEKLVREHLKEQLSDSYYLINNFYFFNNSPCEIDHIIVGPAGFVIVETKHLGGKLFVHPCHYKWLRAPLNNPD
AIKKPMKNPLKQLERNVAEFKSLLSEAEMGELPVQGVLVFPRNSCLLSNRGCGEEFPVLYHDELIEYIDSLEKLDHLSDI
SRLNCLVDNLIDLANQKNKRT

Sequences:

>Translated_261_residues
MEIIDFKQSNLNRVYKYNEELKKTQSNFKQLKSRLLKKQLLKIITFNKSKKRQIQENICYDKTELDKLEQQIFRLTEKIT
ALEKGVAGEKLVREHLKEQLSDSYYLINNFYFFNNSPCEIDHIIVGPAGFVIVETKHLGGKLFVHPCHYKWLRAPLNNPD
AIKKPMKNPLKQLERNVAEFKSLLSEAEMGELPVQGVLVFPRNSCLLSNRGCGEEFPVLYHDELIEYIDSLEKLDHLSDI
SRLNCLVDNLIDLANQKNKRT
>Mature_261_residues
MEIIDFKQSNLNRVYKYNEELKKTQSNFKQLKSRLLKKQLLKIITFNKSKKRQIQENICYDKTELDKLEQQIFRLTEKIT
ALEKGVAGEKLVREHLKEQLSDSYYLINNFYFFNNSPCEIDHIIVGPAGFVIVETKHLGGKLFVHPCHYKWLRAPLNNPD
AIKKPMKNPLKQLERNVAEFKSLLSEAEMGELPVQGVLVFPRNSCLLSNRGCGEEFPVLYHDELIEYIDSLEKLDHLSDI
SRLNCLVDNLIDLANQKNKRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30454; Mature: 30454

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50965 NERD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIDFKQSNLNRVYKYNEELKKTQSNFKQLKSRLLKKQLLKIITFNKSKKRQIQENICY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
DKTELDKLEQQIFRLTEKITALEKGVAGEKLVREHLKEQLSDSYYLINNFYFFNNSPCEI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCE
DHIIVGPAGFVIVETKHLGGKLFVHPCHYKWLRAPLNNPDAIKKPMKNPLKQLERNVAEF
EEEEECCCCEEEEEEECCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KSLLSEAEMGELPVQGVLVFPRNSCLLSNRGCGEEFPVLYHDELIEYIDSLEKLDHLSDI
HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRLNCLVDNLIDLANQKNKRT
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEIIDFKQSNLNRVYKYNEELKKTQSNFKQLKSRLLKKQLLKIITFNKSKKRQIQENICY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
DKTELDKLEQQIFRLTEKITALEKGVAGEKLVREHLKEQLSDSYYLINNFYFFNNSPCEI
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCE
DHIIVGPAGFVIVETKHLGGKLFVHPCHYKWLRAPLNNPDAIKKPMKNPLKQLERNVAEF
EEEEECCCCEEEEEEECCCCEEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
KSLLSEAEMGELPVQGVLVFPRNSCLLSNRGCGEEFPVLYHDELIEYIDSLEKLDHLSDI
HHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SRLNCLVDNLIDLANQKNKRT
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA