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The map label for this gene is wcaL [C]

Identifier: 188585044

GI number: 188585044

Start: 422229

End: 423467

Strand: Direct

Name: wcaL [C]

Synonym: Nther_0405

Alternate gene names: 188585044

Gene position: 422229-423467 (Clockwise)

Preceding gene: 188585043

Following gene: 188585045

Centisome position: 13.34

GC content: 33.49

Gene sequence:

>1239_bases
ATGGCGTTATGTTTTTTTGTTTTCAGGGAAATAATACATATAGGTCGTGACAAACGTGATAATTTAAAAGAACTAAAACA
ATTATGTATAAAGGGTGTTCAGAAAAATATGAAGGTATTGCAAGTGTATCGCCCAGTTGAAGGTGGAATAAAAAGACATT
TAGAAATTTTAGATCAGAATTTACCAAATCACAATATAATCCCTGTATTTTGTGGTCCTCAAGACGATATGAATAGTTTG
AATATATCAGATAATTATCAGCTTGAAATTACCGATGGTTTGAATATACAAGTACTGGCTAATAATGTATATAGATTAAG
GAACATTGTTTCCAAAGTCAAGCCAGATATTATTCATTCCCATGGATACAAAGCATCGGCTGTTGTCTATGGTCTTTCTC
CCTTTTTAAGAATTCCATGGATCAGTACTTTACATGGATACAAAACCTGGGGAAGAAATATCACAACCAAAAGAACTGTA
TTTGATTTGATGTCAAAACAGGTACTGCAGCGGCCTCAAAAAGTTTTGTGCGTATCTAAAGCACTGCAAAAAGAACTGCA
TTCCATAGGTATGGAAGAGGATAAATGTAAAGTTGTCTATAATGGAATTCCCATTTCTCAGTATCATCAAAATGTTGATG
ACATTTTTGGTGGCAATTATCACAGGCCCAACAGTAAATTAATTACCTATATCGGTAGGATGATGCCGGATAAAGGTTTA
GATACTTTTTTAACTGCTATAAAAATATTAGTTGATAAATACAAATCATATATTGATTCTATGAATTTACAATTTGTAAT
AGCTGGTGATGGCCCCTGGAGAAATTATTATGAGCAGATGTCTTGGGAATGGAAAATCGCACCTTATATAACTTTTTTAG
GTTATCGCAAAGATATATCAAATATTTTAAAACAATCCTATGCTCTCTGTATTCCATCCAGGTATGAGGGCCAGTCAATT
ACAGCAGTAGAGGCCATGGCGTCATTTTGTCCTGTCATAGCTAGCAGAACTGGGGGGTTACAAGAAATACTGTCTCATGG
TGAAACGGGCTTGTTAATTCGTCGAAATGACCCGCTAGAACTAGCTCAAAAAATTATTTTAATATTGAAAAATAAACATC
TTAGAAGGCAATTAATTTTTAAAGCTTATTACAAAGCGTTGAAAAACTTTAGTGACAAAAAGATGACTTCAGAAATAGTT
GAAACATACAATGAGGTGGCTAAAAATGTTAGGGTTTAA

Upstream 100 bases:

>100_bases
CTGCCAAACCCTTTGAAAATGGCTTAGACCTATTTGGTATGCATTATAAAGACTTAGAAAAGGAGTTTAATGTCACAGTT
GATCTATTAACATAACGCTA

Downstream 100 bases:

>100_bases
CATCCACTTCATTAAAACTAAATCATTATATGTGAGAGGAAAGTGTTTTGGAATTTTGTTATTGACACTATTATTAGTGT
CCTTTGTTAATATAAGTCAT

Product: glycosyl transferase group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MALCFFVFREIIHIGRDKRDNLKELKQLCIKGVQKNMKVLQVYRPVEGGIKRHLEILDQNLPNHNIIPVFCGPQDDMNSL
NISDNYQLEITDGLNIQVLANNVYRLRNIVSKVKPDIIHSHGYKASAVVYGLSPFLRIPWISTLHGYKTWGRNITTKRTV
FDLMSKQVLQRPQKVLCVSKALQKELHSIGMEEDKCKVVYNGIPISQYHQNVDDIFGGNYHRPNSKLITYIGRMMPDKGL
DTFLTAIKILVDKYKSYIDSMNLQFVIAGDGPWRNYYEQMSWEWKIAPYITFLGYRKDISNILKQSYALCIPSRYEGQSI
TAVEAMASFCPVIASRTGGLQEILSHGETGLLIRRNDPLELAQKIILILKNKHLRRQLIFKAYYKALKNFSDKKMTSEIV
ETYNEVAKNVRV

Sequences:

>Translated_412_residues
MALCFFVFREIIHIGRDKRDNLKELKQLCIKGVQKNMKVLQVYRPVEGGIKRHLEILDQNLPNHNIIPVFCGPQDDMNSL
NISDNYQLEITDGLNIQVLANNVYRLRNIVSKVKPDIIHSHGYKASAVVYGLSPFLRIPWISTLHGYKTWGRNITTKRTV
FDLMSKQVLQRPQKVLCVSKALQKELHSIGMEEDKCKVVYNGIPISQYHQNVDDIFGGNYHRPNSKLITYIGRMMPDKGL
DTFLTAIKILVDKYKSYIDSMNLQFVIAGDGPWRNYYEQMSWEWKIAPYITFLGYRKDISNILKQSYALCIPSRYEGQSI
TAVEAMASFCPVIASRTGGLQEILSHGETGLLIRRNDPLELAQKIILILKNKHLRRQLIFKAYYKALKNFSDKKMTSEIV
ETYNEVAKNVRV
>Mature_411_residues
ALCFFVFREIIHIGRDKRDNLKELKQLCIKGVQKNMKVLQVYRPVEGGIKRHLEILDQNLPNHNIIPVFCGPQDDMNSLN
ISDNYQLEITDGLNIQVLANNVYRLRNIVSKVKPDIIHSHGYKASAVVYGLSPFLRIPWISTLHGYKTWGRNITTKRTVF
DLMSKQVLQRPQKVLCVSKALQKELHSIGMEEDKCKVVYNGIPISQYHQNVDDIFGGNYHRPNSKLITYIGRMMPDKGLD
TFLTAIKILVDKYKSYIDSMNLQFVIAGDGPWRNYYEQMSWEWKIAPYITFLGYRKDISNILKQSYALCIPSRYEGQSIT
AVEAMASFCPVIASRTGGLQEILSHGETGLLIRRNDPLELAQKIILILKNKHLRRQLIFKAYYKALKNFSDKKMTSEIVE
TYNEVAKNVRV

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=326, Percent_Identity=22.6993865030675, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 47507; Mature: 47376

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALCFFVFREIIHIGRDKRDNLKELKQLCIKGVQKNMKVLQVYRPVEGGIKRHLEILDQN
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
LPNHNIIPVFCGPQDDMNSLNISDNYQLEITDGLNIQVLANNVYRLRNIVSKVKPDIIHS
CCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHC
HGYKASAVVYGLSPFLRIPWISTLHGYKTWGRNITTKRTVFDLMSKQVLQRPQKVLCVSK
CCCCHHEEEECCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALQKELHSIGMEEDKCKVVYNGIPISQYHQNVDDIFGGNYHRPNSKLITYIGRMMPDKGL
HHHHHHHHCCCCCCCCEEEECCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCH
DTFLTAIKILVDKYKSYIDSMNLQFVIAGDGPWRNYYEQMSWEWKIAPYITFLGYRKDIS
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH
NILKQSYALCIPSRYEGQSITAVEAMASFCPVIASRTGGLQEILSHGETGLLIRRNDPLE
HHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCHHH
LAQKIILILKNKHLRRQLIFKAYYKALKNFSDKKMTSEIVETYNEVAKNVRV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALCFFVFREIIHIGRDKRDNLKELKQLCIKGVQKNMKVLQVYRPVEGGIKRHLEILDQN
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
LPNHNIIPVFCGPQDDMNSLNISDNYQLEITDGLNIQVLANNVYRLRNIVSKVKPDIIHS
CCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHHCCHHHHC
HGYKASAVVYGLSPFLRIPWISTLHGYKTWGRNITTKRTVFDLMSKQVLQRPQKVLCVSK
CCCCHHEEEECCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALQKELHSIGMEEDKCKVVYNGIPISQYHQNVDDIFGGNYHRPNSKLITYIGRMMPDKGL
HHHHHHHHCCCCCCCCEEEECCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHCCCCCH
DTFLTAIKILVDKYKSYIDSMNLQFVIAGDGPWRNYYEQMSWEWKIAPYITFLGYRKDIS
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHH
NILKQSYALCIPSRYEGQSITAVEAMASFCPVIASRTGGLQEILSHGETGLLIRRNDPLE
HHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCHHH
LAQKIILILKNKHLRRQLIFKAYYKALKNFSDKKMTSEIVETYNEVAKNVRV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]