| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is mod [H]
Identifier: 188585004
GI number: 188585004
Start: 379761
End: 381674
Strand: Direct
Name: mod [H]
Synonym: Nther_0364
Alternate gene names: 188585004
Gene position: 379761-381674 (Clockwise)
Preceding gene: 188585003
Following gene: 188585005
Centisome position: 12.0
GC content: 32.08
Gene sequence:
>1914_bases ATGAAAAAATTTAACGGTGAAAGTAAAGACATAGTAGCTGAAAATATTTCTAAACTCAAGGAACTTTTTCCTGAAGTGGA AAGTGAGGGTAAAATAGATTTTGAAAGGTTGCAAGAAATATTAGGGGAGTATATTGAAGACAAAGAAGAAAAATATAGAT TCGAATGGAACGGTAAATCTAAAGCTATTAAATTATCACAAACGCCTTCTACTGGAACACTTAGGCCCTGCAAAGAAGAA AGTAAAAATTGGGATGAAACTGAAAATCTGTTTATTGAAGGAGATAATCTTGAAGTATTAAAGTTGCTTCAGAAGACTTA TCACAGTAGTATTAAGATGATTTATATAGACCCACCTTACAATACAGGTGGAGACTTTGTTTATGAAGATGATTTTCAAG ATAACTTAAATAATTATCTTAAAATAACAGGTCAAATTAATGAAGAAGGAAAGAAAAATAGTACTAATACAGAAAATGGT GGAAGATTTCATACTAAATGGTTGAATATGATGTATCCAAGGCTGAAATTAGCAAGAAACTTACTTAACGATCAAGGAGT AATATTTATTTCCATTGACGATAACGAATCAGGTAACCTATGGAAAGTGTGTAATGAGATCTTTGGCGAGACAAACTTTG TTGCTGAAATAACTGTCATAGTAAAAACAGAAGGACGTAGGTATGGTTTTTTTGCAAAATCACATGAGAAAATCTATGTT TATGCTAAGAACATTGATAACTTAGCTCTAAATGAGATTGATATCAAAGGTAAAAAATTTACTTATAGAGATGAATTTGG AGGCTTTAACATTAAAGAACTGAGAAATCAAAACACTAGAGCTTTTAATTCTAGTAACAGACCAAATTTAAGATATCCAT TCTATGTTAATACTGATAATGTAGATGAGAATGGATTTATGGAAGTAAGTGTTGACTATCAAGAAGGATGGGAAGAGGTT TATCCAATGATAACCAATGGTTTGAAAAGTGTTTGGAGATGGGGGAAGGAATCTGCTAGGCAGCAAGAAAATAAAAATTT AGTAGCAAGAAGAGGTCGTGATGGTATAATCCGAATATATCAGAAATATCGCAAATTAACTGAAATACCCAAAACAGTAT GGAAAGATAAGGAGATAATTTCTATTAAAGGAACAAAAGAGGTACAAGAATTATTAGGAAGTGGAATTTTTGATTTTCCC AAGCCTGTTAAGTTATTGTCAGATATTATTACCATAGCAACTGATCAAGATTCTATTATATTAGACTTTTTTTCAGGGGC CGCTACTACTGCTCACGCTACAATCAAAAAAAATGCTGAAGATGGTGGCACCCGAAAATATATAATGGTGCAACTACCTG AGAAGTCAGACGAAAAATCAGAAGCATACAAGGCTGGTTATAAAAATATTTCCGAGATAGGCAAAGAACGCATACGCCGA GCAGGAGAAAAAATCCTTGATGAAAACAAAGATAAAGAAGGTATAGAAAACTTAGATACAGGTTTTAAAGTGTTCAAATT AGATTCATCAAACCTTAAAGAATGGAACCCTGATTATGACAACTTAGAAATGACTCTTGAAGACATGGTAGAGAACTTTG TTGATGGAAGAACTGAAGAAGATGTGGTATATGAAATTATGCTTAAATATGGCATTGATTTAACCTTCCCTATAGAAACT ACCGAGATTGATGGCAAAAAGGTTTATAATATCGGTTTTGGTGCTTTATTTGTTTGTTTAGATGATGAAATAACATTAAA TGTTGTAAAGAGTATAGCTAAACTAAAAGAAGACATTGATCCAGAAATCACAAGAGTAGTATTTAAAGACAACGGTTTTC AGAGTGATGCTGCTAAAACTAATGCAATAGAAATACTTAAACGACATGGTATAGAAGAAATAATGAGCATCTAG
Upstream 100 bases:
>100_bases GAAAATGAATGTAGAGATAAAAAAGTTAAAAGAAGAGAAGAAAAACTTAATTGATAAGCTAAACAGCTAAATCTGACAAA AGTATGGGAGGGTAACTGCA
Downstream 100 bases:
>100_bases GGGGTGTTTAGATGAAATTACAATTTAATCCTAACTTAGACTTTCAACAAGAGGCTATTAGATCAATTGTAGATATATTT GAAGGACAACCTATTACGCA
Product: DNA methylase N-4/N-6 domain protein
Products: NA
Alternate protein names: M.EcoP15I; EcoP15I methyltransferase [H]
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MKKFNGESKDIVAENISKLKELFPEVESEGKIDFERLQEILGEYIEDKEEKYRFEWNGKSKAIKLSQTPSTGTLRPCKEE SKNWDETENLFIEGDNLEVLKLLQKTYHSSIKMIYIDPPYNTGGDFVYEDDFQDNLNNYLKITGQINEEGKKNSTNTENG GRFHTKWLNMMYPRLKLARNLLNDQGVIFISIDDNESGNLWKVCNEIFGETNFVAEITVIVKTEGRRYGFFAKSHEKIYV YAKNIDNLALNEIDIKGKKFTYRDEFGGFNIKELRNQNTRAFNSSNRPNLRYPFYVNTDNVDENGFMEVSVDYQEGWEEV YPMITNGLKSVWRWGKESARQQENKNLVARRGRDGIIRIYQKYRKLTEIPKTVWKDKEIISIKGTKEVQELLGSGIFDFP KPVKLLSDIITIATDQDSIILDFFSGAATTAHATIKKNAEDGGTRKYIMVQLPEKSDEKSEAYKAGYKNISEIGKERIRR AGEKILDENKDKEGIENLDTGFKVFKLDSSNLKEWNPDYDNLEMTLEDMVENFVDGRTEEDVVYEIMLKYGIDLTFPIET TEIDGKKVYNIGFGALFVCLDDEITLNVVKSIAKLKEDIDPEITRVVFKDNGFQSDAAKTNAIEILKRHGIEEIMSI
Sequences:
>Translated_637_residues MKKFNGESKDIVAENISKLKELFPEVESEGKIDFERLQEILGEYIEDKEEKYRFEWNGKSKAIKLSQTPSTGTLRPCKEE SKNWDETENLFIEGDNLEVLKLLQKTYHSSIKMIYIDPPYNTGGDFVYEDDFQDNLNNYLKITGQINEEGKKNSTNTENG GRFHTKWLNMMYPRLKLARNLLNDQGVIFISIDDNESGNLWKVCNEIFGETNFVAEITVIVKTEGRRYGFFAKSHEKIYV YAKNIDNLALNEIDIKGKKFTYRDEFGGFNIKELRNQNTRAFNSSNRPNLRYPFYVNTDNVDENGFMEVSVDYQEGWEEV YPMITNGLKSVWRWGKESARQQENKNLVARRGRDGIIRIYQKYRKLTEIPKTVWKDKEIISIKGTKEVQELLGSGIFDFP KPVKLLSDIITIATDQDSIILDFFSGAATTAHATIKKNAEDGGTRKYIMVQLPEKSDEKSEAYKAGYKNISEIGKERIRR AGEKILDENKDKEGIENLDTGFKVFKLDSSNLKEWNPDYDNLEMTLEDMVENFVDGRTEEDVVYEIMLKYGIDLTFPIET TEIDGKKVYNIGFGALFVCLDDEITLNVVKSIAKLKEDIDPEITRVVFKDNGFQSDAAKTNAIEILKRHGIEEIMSI >Mature_637_residues MKKFNGESKDIVAENISKLKELFPEVESEGKIDFERLQEILGEYIEDKEEKYRFEWNGKSKAIKLSQTPSTGTLRPCKEE SKNWDETENLFIEGDNLEVLKLLQKTYHSSIKMIYIDPPYNTGGDFVYEDDFQDNLNNYLKITGQINEEGKKNSTNTENG GRFHTKWLNMMYPRLKLARNLLNDQGVIFISIDDNESGNLWKVCNEIFGETNFVAEITVIVKTEGRRYGFFAKSHEKIYV YAKNIDNLALNEIDIKGKKFTYRDEFGGFNIKELRNQNTRAFNSSNRPNLRYPFYVNTDNVDENGFMEVSVDYQEGWEEV YPMITNGLKSVWRWGKESARQQENKNLVARRGRDGIIRIYQKYRKLTEIPKTVWKDKEIISIKGTKEVQELLGSGIFDFP KPVKLLSDIITIATDQDSIILDFFSGAATTAHATIKKNAEDGGTRKYIMVQLPEKSDEKSEAYKAGYKNISEIGKERIRR AGEKILDENKDKEGIENLDTGFKVFKLDSSNLKEWNPDYDNLEMTLEDMVENFVDGRTEEDVVYEIMLKYGIDLTFPIET TEIDGKKVYNIGFGALFVCLDDEITLNVVKSIAKLKEDIDPEITRVVFKDNGFQSDAAKTNAIEILKRHGIEEIMSI
Specific function: Binds the system-specific DNA recognition site 5'- CAGCAC-3'. Necessary for both restriction and methylation (of one of the two A's) [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 73517; Mature: 73517
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFNGESKDIVAENISKLKELFPEVESEGKIDFERLQEILGEYIEDKEEKYRFEWNGKS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCEEEEECCCC KAIKLSQTPSTGTLRPCKEESKNWDETENLFIEGDNLEVLKLLQKTYHSSIKMIYIDPPY CEEEEECCCCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCC NTGGDFVYEDDFQDNLNNYLKITGQINEEGKKNSTNTENGGRFHTKWLNMMYPRLKLARN CCCCCEEECCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH LLNDQGVIFISIDDNESGNLWKVCNEIFGETNFVAEITVIVKTEGRRYGFFAKSHEKIYV HCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCEECCEECCCCEEEE YAKNIDNLALNEIDIKGKKFTYRDEFGGFNIKELRNQNTRAFNSSNRPNLRYPFYVNTDN EEECCCCCEEEEEECCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCC VDENGFMEVSVDYQEGWEEVYPMITNGLKSVWRWGKESARQQENKNLVARRGRDGIIRIY CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH QKYRKLTEIPKTVWKDKEIISIKGTKEVQELLGSGIFDFPKPVKLLSDIITIATDQDSII HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCEE LDFFSGAATTAHATIKKNAEDGGTRKYIMVQLPEKSDEKSEAYKAGYKNISEIGKERIRR EEECCCCCHHEEHEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGEKILDENKDKEGIENLDTGFKVFKLDSSNLKEWNPDYDNLEMTLEDMVENFVDGRTEE HHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH DVVYEIMLKYGIDLTFPIETTEIDGKKVYNIGFGALFVCLDDEITLNVVKSIAKLKEDID HHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCC PEITRVVFKDNGFQSDAAKTNAIEILKRHGIEEIMSI CCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MKKFNGESKDIVAENISKLKELFPEVESEGKIDFERLQEILGEYIEDKEEKYRFEWNGKS CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHCEEEEECCCC KAIKLSQTPSTGTLRPCKEESKNWDETENLFIEGDNLEVLKLLQKTYHSSIKMIYIDPPY CEEEEECCCCCCCCCCCHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCC NTGGDFVYEDDFQDNLNNYLKITGQINEEGKKNSTNTENGGRFHTKWLNMMYPRLKLARN CCCCCEEECCCHHHCCCCEEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH LLNDQGVIFISIDDNESGNLWKVCNEIFGETNFVAEITVIVKTEGRRYGFFAKSHEKIYV HCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCCEECCEECCCCEEEE YAKNIDNLALNEIDIKGKKFTYRDEFGGFNIKELRNQNTRAFNSSNRPNLRYPFYVNTDN EEECCCCCEEEEEECCCCEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCC VDENGFMEVSVDYQEGWEEVYPMITNGLKSVWRWGKESARQQENKNLVARRGRDGIIRIY CCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHH QKYRKLTEIPKTVWKDKEIISIKGTKEVQELLGSGIFDFPKPVKLLSDIITIATDQDSII HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCEE LDFFSGAATTAHATIKKNAEDGGTRKYIMVQLPEKSDEKSEAYKAGYKNISEIGKERIRR EEECCCCCHHEEHEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH AGEKILDENKDKEGIENLDTGFKVFKLDSSNLKEWNPDYDNLEMTLEDMVENFVDGRTEE HHHHHHHCCCCHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH DVVYEIMLKYGIDLTFPIETTEIDGKKVYNIGFGALFVCLDDEITLNVVKSIAKLKEDID HHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCEEEEEEECCCHHHHHHHHHHHHHHCCC PEITRVVFKDNGFQSDAAKTNAIEILKRHGIEEIMSI CCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2837577 [H]