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The map label for this gene is dcyD [H]

Identifier: 188584951

GI number: 188584951

Start: 326660

End: 327667

Strand: Direct

Name: dcyD [H]

Synonym: Nther_0310

Alternate gene names: 188584951

Gene position: 326660-327667 (Clockwise)

Preceding gene: 188584950

Following gene: 188584952

Centisome position: 10.32

GC content: 36.71

Gene sequence:

>1008_bases
ATGGAGGAGTTTAAGAAAGCGTTAACAAAGAGAGTATCATTAGTATCAGAACCTACGCCCTTACGTGAAAGCAAGAATAT
GTCGGACAAGCTAAATCAGCAACTATTAATTAAAGAAGATGATACTACTGGGATTTGTTTAGGAGGAAACAAAGTAAGAA
AGCTTGAATACTTGATCTATGATGCTTTAGAAAAAGAAGTTGATACAGTGATTACAACAGGAGGACTTCAATCCAACCAC
GCTCGCCTGACAACTGCCATTGCTAGGAAATATAATTTACAACCCGAATTAGTTTTAAAGGATCAGGGCAAGAAATCCAA
TGGTAATGTATTACTAAATCAATTAATGGATGCAAATTTCCATCTGGTTCAGGACGAAAAAGAAATAGATCAGAAAATTA
GTCAGTTACGAGACGAATTACAAAATCAAGGTAATAAAGCCTATACTATTCCTCTAGGTGGCTCTAATGTAATTGGTGTA
ATGGGATATGTAAGAGCAGCTCTAGAATTAAGAGAACAACTTGATAATAGGAATATAGGTGAAGCAACGGTGGTTTTACC
AGTAGGATCAGGTGGTACCCTGGCTGGCTTAGTACTGGCAAATAATCTATGGGATTTAAACCTAAATTTTGTAGGAATTA
GTGTCAGTAGATCTAAAGATACCATGAACAATCTTATTTCAGAATTTGTTGATGAAGTGGTAGATAAATATTCGCTTAAT
GTATCTCGAGAAAATATTCCGAAAATTTTTGATGAGTTTGTAGGGCCTGGTTATGGGATCCCCGATGAAGATACAATTGA
CGCAATCAAATTTGCAGCTAAAGCAGAAGGAGTCATCTTAGATCCTGTGTATACCGGTAAGGCAATGAAGGGTTTACTTC
ATTTAAAAGAAACTAATACATTATCAGGACCAGGATCCTCCTTTGATCCAGAGCATCCAATAATCTTCTGGCATACCGGT
GGCATGCCGGCTGTATTTGCCTATGAAGAGGAATGTAAAAATAACTAA

Upstream 100 bases:

>100_bases
ATAAGTGAAGCAATTAAGATCAGTCTTGGATTAATAGAATTCTAAAACGTAGTGTAATCACTGCGTTTTTTATATTTTAA
AGTGGTAGAGGAGGTTTTTT

Downstream 100 bases:

>100_bases
TTTATAATTTGATTTATTGGGAGGGGAGATTCTTGAGTAAAGTAGCTGTTGAAAAAACTAGAGGAGATTTAGTGGAAAGC
TTACATAGAGCAACCATTGC

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MEEFKKALTKRVSLVSEPTPLRESKNMSDKLNQQLLIKEDDTTGICLGGNKVRKLEYLIYDALEKEVDTVITTGGLQSNH
ARLTTAIARKYNLQPELVLKDQGKKSNGNVLLNQLMDANFHLVQDEKEIDQKISQLRDELQNQGNKAYTIPLGGSNVIGV
MGYVRAALELREQLDNRNIGEATVVLPVGSGGTLAGLVLANNLWDLNLNFVGISVSRSKDTMNNLISEFVDEVVDKYSLN
VSRENIPKIFDEFVGPGYGIPDEDTIDAIKFAAKAEGVILDPVYTGKAMKGLLHLKETNTLSGPGSSFDPEHPIIFWHTG
GMPAVFAYEEECKNN

Sequences:

>Translated_335_residues
MEEFKKALTKRVSLVSEPTPLRESKNMSDKLNQQLLIKEDDTTGICLGGNKVRKLEYLIYDALEKEVDTVITTGGLQSNH
ARLTTAIARKYNLQPELVLKDQGKKSNGNVLLNQLMDANFHLVQDEKEIDQKISQLRDELQNQGNKAYTIPLGGSNVIGV
MGYVRAALELREQLDNRNIGEATVVLPVGSGGTLAGLVLANNLWDLNLNFVGISVSRSKDTMNNLISEFVDEVVDKYSLN
VSRENIPKIFDEFVGPGYGIPDEDTIDAIKFAAKAEGVILDPVYTGKAMKGLLHLKETNTLSGPGSSFDPEHPIIFWHTG
GMPAVFAYEEECKNN
>Mature_335_residues
MEEFKKALTKRVSLVSEPTPLRESKNMSDKLNQQLLIKEDDTTGICLGGNKVRKLEYLIYDALEKEVDTVITTGGLQSNH
ARLTTAIARKYNLQPELVLKDQGKKSNGNVLLNQLMDANFHLVQDEKEIDQKISQLRDELQNQGNKAYTIPLGGSNVIGV
MGYVRAALELREQLDNRNIGEATVVLPVGSGGTLAGLVLANNLWDLNLNFVGISVSRSKDTMNNLISEFVDEVVDKYSLN
VSRENIPKIFDEFVGPGYGIPDEDTIDAIKFAAKAEGVILDPVYTGKAMKGLLHLKETNTLSGPGSSFDPEHPIIFWHTG
GMPAVFAYEEECKNN

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=325, Percent_Identity=36.9230769230769, Blast_Score=217, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 36981; Mature: 36981

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFKKALTKRVSLVSEPTPLRESKNMSDKLNQQLLIKEDDTTGICLGGNKVRKLEYLIY
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHH
DALEKEVDTVITTGGLQSNHARLTTAIARKYNLQPELVLKDQGKKSNGNVLLNQLMDANF
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCCCE
HLVQDEKEIDQKISQLRDELQNQGNKAYTIPLGGSNVIGVMGYVRAALELREQLDNRNIG
EEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
EATVVLPVGSGGTLAGLVLANNLWDLNLNFVGISVSRSKDTMNNLISEFVDEVVDKYSLN
CEEEEEEECCCCCEEHHEEECCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
VSRENIPKIFDEFVGPGYGIPDEDTIDAIKFAAKAEGVILDPVYTGKAMKGLLHLKETNT
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHEEECCCCC
LSGPGSSFDPEHPIIFWHTGGMPAVFAYEEECKNN
CCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHCCC
>Mature Secondary Structure
MEEFKKALTKRVSLVSEPTPLRESKNMSDKLNQQLLIKEDDTTGICLGGNKVRKLEYLIY
CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEECCCCHHHHHHHHH
DALEKEVDTVITTGGLQSNHARLTTAIARKYNLQPELVLKDQGKKSNGNVLLNQLMDANF
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCCCE
HLVQDEKEIDQKISQLRDELQNQGNKAYTIPLGGSNVIGVMGYVRAALELREQLDNRNIG
EEECCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
EATVVLPVGSGGTLAGLVLANNLWDLNLNFVGISVSRSKDTMNNLISEFVDEVVDKYSLN
CEEEEEEECCCCCEEHHEEECCEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCC
VSRENIPKIFDEFVGPGYGIPDEDTIDAIKFAAKAEGVILDPVYTGKAMKGLLHLKETNT
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHEEECCCCC
LSGPGSSFDPEHPIIFWHTGGMPAVFAYEEECKNN
CCCCCCCCCCCCCEEEEECCCCCEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA