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The map label for this gene is yrbG [C]

Identifier: 188584915

GI number: 188584915

Start: 288775

End: 289806

Strand: Reverse

Name: yrbG [C]

Synonym: Nther_0274

Alternate gene names: 188584915

Gene position: 289806-288775 (Counterclockwise)

Preceding gene: 188584916

Following gene: 188584913

Centisome position: 9.15

GC content: 34.3

Gene sequence:

>1032_bases
GTGAATAACATCATATTAACATGGTTAGTTTTTATTGGAACAGCAGCAGCAATATTTTTTAGTGGCAAAAGACTTTCAAC
AGTTGCAGATAAAATTGGTAAAGTTACCGGACTTGGTGGCGCTTTTGTCGGTGTACTATTGCTACCAATAGTCACTACTT
TGCCCGAGCTTTCTGTTACAATTTCTGCAATAATTATAGATGCTCCTAATCTTGCCCTGGGTAATTTATTTGGAAGTAAT
CTACTTAATCTATCTTTGATTTTTTTTATGGATATAGCTCAGGGAAAAGGGCCGATAGCTAAAAAGTTAAGCTTTGATCA
TATACTGGCTGTTTCCATGCTGACAATAATCTTAACTATAGCCCTTACAGGCATCGTCGAACAAGAACTTTTTACAATTG
GTCACTTAGGTGGAAGCAGTTTATTGATATTTTTTGTTTATTTCGTTTCACATACAATTCATTATCGGTATCATAAAAGA
AATCCTAATCTATCAACTGACCCTGTTGACTCATCAGAACCACCTGATGAAAGAAATGATTCGAAAAATAATACTAGAAG
TTCTGAATCTTTAAAAAAACTGGTGTTTGAGTTTGCCGTATTGGGCATAATTATCATAGTTTCAGCTAGGTTTTTATCTG
GAGCTGCTGATACAATCGCAGAAAATACTGGGTTAACAGAGGGGCTATTAGGTGTAGTATTCCTGGCACTCAGCACATCT
CTTCCAGAGCTTGTTATTACACTGTCAGCAGTTAAAAAAGGCTTCTTTGATCAAGCCTTTGGTAGCATTCTAGGAGCCAA
TATACTAAATATGGGGTTAATATTTATTGTAGACACAATCTACTTAAAAGGGCCAATTTTACAATTTAGTGAACAGGAAA
TTTTTAATGCAGCTGTTATTGGGATATTAATGACTAATGTGATTGCAGCTGGTATTATATACCGCTCCAAAAGAAGCTAT
TTTTATCTGGGAATTGATGCAATTGTGATATTAATTCTATATATAATATTTTTAATCAGTTCAATAGCATAA

Upstream 100 bases:

>100_bases
TTAATTACCGAATAATTTGCCAATAATAAAATAGTGAACTATAAATATGTGATGCTATCCTTATTAAAATATGAATTCCT
ATGACTAATATGTAAAGGAA

Downstream 100 bases:

>100_bases
TTCCCATAACTAAAACATCATAATTCTTCGGTAATGTTTAAATCCATGTAAGGGGATTCAAACCTATTTCCAATAAGTAC
TCTTATTCTTCCCACTTGTA

Product: sodium/calcium exchanger membrane region

Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNNIILTWLVFIGTAAAIFFSGKRLSTVADKIGKVTGLGGAFVGVLLLPIVTTLPELSVTISAIIIDAPNLALGNLFGSN
LLNLSLIFFMDIAQGKGPIAKKLSFDHILAVSMLTIILTIALTGIVEQELFTIGHLGGSSLLIFFVYFVSHTIHYRYHKR
NPNLSTDPVDSSEPPDERNDSKNNTRSSESLKKLVFEFAVLGIIIIVSARFLSGAADTIAENTGLTEGLLGVVFLALSTS
LPELVITLSAVKKGFFDQAFGSILGANILNMGLIFIVDTIYLKGPILQFSEQEIFNAAVIGILMTNVIAAGIIYRSKRSY
FYLGIDAIVILILYIIFLISSIA

Sequences:

>Translated_343_residues
MNNIILTWLVFIGTAAAIFFSGKRLSTVADKIGKVTGLGGAFVGVLLLPIVTTLPELSVTISAIIIDAPNLALGNLFGSN
LLNLSLIFFMDIAQGKGPIAKKLSFDHILAVSMLTIILTIALTGIVEQELFTIGHLGGSSLLIFFVYFVSHTIHYRYHKR
NPNLSTDPVDSSEPPDERNDSKNNTRSSESLKKLVFEFAVLGIIIIVSARFLSGAADTIAENTGLTEGLLGVVFLALSTS
LPELVITLSAVKKGFFDQAFGSILGANILNMGLIFIVDTIYLKGPILQFSEQEIFNAAVIGILMTNVIAAGIIYRSKRSY
FYLGIDAIVILILYIIFLISSIA
>Mature_343_residues
MNNIILTWLVFIGTAAAIFFSGKRLSTVADKIGKVTGLGGAFVGVLLLPIVTTLPELSVTISAIIIDAPNLALGNLFGSN
LLNLSLIFFMDIAQGKGPIAKKLSFDHILAVSMLTIILTIALTGIVEQELFTIGHLGGSSLLIFFVYFVSHTIHYRYHKR
NPNLSTDPVDSSEPPDERNDSKNNTRSSESLKKLVFEFAVLGIIIIVSARFLSGAADTIAENTGLTEGLLGVVFLALSTS
LPELVITLSAVKKGFFDQAFGSILGANILNMGLIFIVDTIYLKGPILQFSEQEIFNAAVIGILMTNVIAAGIIYRSKRSY
FYLGIDAIVILILYIIFLISSIA

Specific function: Unknown

COG id: COG0530

COG function: function code P; Ca2+/Na+ antiporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium/potassium/calcium exchanger family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004481
- InterPro:   IPR004837 [H]

Pfam domain/function: PF01699 Na_Ca_ex [H]

EC number: NA

Molecular weight: Translated: 36991; Mature: 36991

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNIILTWLVFIGTAAAIFFSGKRLSTVADKIGKVTGLGGAFVGVLLLPIVTTLPELSVT
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHEE
ISAIIIDAPNLALGNLFGSNLLNLSLIFFMDIAQGKGPIAKKLSFDHILAVSMLTIILTI
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHH
ALTGIVEQELFTIGHLGGSSLLIFFVYFVSHTIHYRYHKRNPNLSTDPVDSSEPPDERND
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCC
SKNNTRSSESLKKLVFEFAVLGIIIIVSARFLSGAADTIAENTGLTEGLLGVVFLALSTS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCC
LPELVITLSAVKKGFFDQAFGSILGANILNMGLIFIVDTIYLKGPILQFSEQEIFNAAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHH
GILMTNVIAAGIIYRSKRSYFYLGIDAIVILILYIIFLISSIA
HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNIILTWLVFIGTAAAIFFSGKRLSTVADKIGKVTGLGGAFVGVLLLPIVTTLPELSVT
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHEE
ISAIIIDAPNLALGNLFGSNLLNLSLIFFMDIAQGKGPIAKKLSFDHILAVSMLTIILTI
EEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHH
ALTGIVEQELFTIGHLGGSSLLIFFVYFVSHTIHYRYHKRNPNLSTDPVDSSEPPDERND
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCC
SKNNTRSSESLKKLVFEFAVLGIIIIVSARFLSGAADTIAENTGLTEGLLGVVFLALSTS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCC
LPELVITLSAVKKGFFDQAFGSILGANILNMGLIFIVDTIYLKGPILQFSEQEIFNAAVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHH
GILMTNVIAAGIIYRSKRSYFYLGIDAIVILILYIIFLISSIA
HHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]

Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]