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The map label for this gene is ybaP [H]

Identifier: 188584913

GI number: 188584913

Start: 286706

End: 287644

Strand: Reverse

Name: ybaP [H]

Synonym: Nther_0272

Alternate gene names: 188584913

Gene position: 287644-286706 (Counterclockwise)

Preceding gene: 188584915

Following gene: 188584911

Centisome position: 9.09

GC content: 36.95

Gene sequence:

>939_bases
ATGGATTTTTTAGGTGTTACAAGATCAAAAGTAGTTAAAATTTTAGGAATGTTAAGTGTGCTAATACTCTTAACAGCATG
CGGTCCAGAAGAAGCTGCAGTTGATGAAGAATCAAAAGGTATTTTCTATGAAGTAGAAGGTGGAACTAATCAAGTGTACT
TGTTTGGTTCTGTCCATGTGGGACATGAAGACATGTACCCTTTGAGCCCCAAAGTTGAAGATGCCTTTCAAGAGGCCGAT
GTGCTTGGACTTGAAATTGATATGGCTGGCATGACAGAAATGGAAATCGGCCAACAAATGGCAACACTGGGTATGTATCA
CGATGGAACCAAAATGACCGATGTTGTATCAGAGGAAACTTTTGAGGAAGTTGCCGATATGGCAGTGAGTATTGGAATTG
ACCGGGAAACTTTAAATAACTTTAAACCCTGGTATGGAGCTTTGATTGCATCAGAAATTGCCATTAACGAAGCAGGCCTT
TCACCGGAATACGGTATCGAAAACTACTTTATTGAACAATTAGAAGATAAAGAAATGGAAACGATTAGTCTTGAGACTAT
TGAAGATCAAATAGGTATTTATAATAAATTATCCGATGAGTCTCAAGAGATTTATTTAGAAAATACATTAGAAGAGATTG
AATATGTTGAAGAGGAACTAGAAGAATTAATTACCCTTTGGCAGGAAGGAAATACAGAGGAGTTAGCTGATATAAGGGAA
CAGCAAATTGAAGAATCCGAAACTGAATCAATTAAAGATTATCAATTAGCCATGTGGGATGGTCGGGACGAACAAATGAC
AAATGAAATAGAAGATATTCTCAATGATGATAGCGAAGACACTTATTTTATAGTCGTAGGTTCCATGCATTTGGCTGGTG
AAAACAGTATACCTGATCAGTTAAGAGATAGAGGATATGATGTGGAAAGCTTGCATTAA

Upstream 100 bases:

>100_bases
ATAGTTTTGGAAATAGTTTTAGCCCAGCTACGTTCAGTTTCAAGCTATACAATTTCAATAGTGAAATAATAATCAGTATC
TAATAAAAGGGGGAAAGGGA

Downstream 100 bases:

>100_bases
AAGATATTGATTTTCCCAGTACTTAGCACTTCCCACCATAAAACAGTTAAGACAAAAAATTGTTCAGTACGAAAAAACCA
GTGGTTATAGATATAGTTAA

Product: GumN family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MDFLGVTRSKVVKILGMLSVLILLTACGPEEAAVDEESKGIFYEVEGGTNQVYLFGSVHVGHEDMYPLSPKVEDAFQEAD
VLGLEIDMAGMTEMEIGQQMATLGMYHDGTKMTDVVSEETFEEVADMAVSIGIDRETLNNFKPWYGALIASEIAINEAGL
SPEYGIENYFIEQLEDKEMETISLETIEDQIGIYNKLSDESQEIYLENTLEEIEYVEEELEELITLWQEGNTEELADIRE
QQIEESETESIKDYQLAMWDGRDEQMTNEIEDILNDDSEDTYFIVVGSMHLAGENSIPDQLRDRGYDVESLH

Sequences:

>Translated_312_residues
MDFLGVTRSKVVKILGMLSVLILLTACGPEEAAVDEESKGIFYEVEGGTNQVYLFGSVHVGHEDMYPLSPKVEDAFQEAD
VLGLEIDMAGMTEMEIGQQMATLGMYHDGTKMTDVVSEETFEEVADMAVSIGIDRETLNNFKPWYGALIASEIAINEAGL
SPEYGIENYFIEQLEDKEMETISLETIEDQIGIYNKLSDESQEIYLENTLEEIEYVEEELEELITLWQEGNTEELADIRE
QQIEESETESIKDYQLAMWDGRDEQMTNEIEDILNDDSEDTYFIVVGSMHLAGENSIPDQLRDRGYDVESLH
>Mature_312_residues
MDFLGVTRSKVVKILGMLSVLILLTACGPEEAAVDEESKGIFYEVEGGTNQVYLFGSVHVGHEDMYPLSPKVEDAFQEAD
VLGLEIDMAGMTEMEIGQQMATLGMYHDGTKMTDVVSEETFEEVADMAVSIGIDRETLNNFKPWYGALIASEIAINEAGL
SPEYGIENYFIEQLEDKEMETISLETIEDQIGIYNKLSDESQEIYLENTLEEIEYVEEELEELITLWQEGNTEELADIRE
QQIEESETESIKDYQLAMWDGRDEQMTNEIEDILNDDSEDTYFIVVGSMHLAGENSIPDQLRDRGYDVESLH

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=255, Percent_Identity=23.921568627451, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010891 [H]

Pfam domain/function: PF07446 GumN [H]

EC number: NA

Molecular weight: Translated: 35301; Mature: 35301

Theoretical pI: Translated: 3.60; Mature: 3.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLGVTRSKVVKILGMLSVLILLTACGPEEAAVDEESKGIFYEVEGGTNQVYLFGSVHV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEEECCCCEEEEEEEEEE
GHEDMYPLSPKVEDAFQEADVLGLEIDMAGMTEMEIGQQMATLGMYHDGTKMTDVVSEET
CCCCCCCCCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FEEVADMAVSIGIDRETLNNFKPWYGALIASEIAINEAGLSPEYGIENYFIEQLEDKEME
HHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
TISLETIEDQIGIYNKLSDESQEIYLENTLEEIEYVEEELEELITLWQEGNTEELADIRE
EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
QQIEESETESIKDYQLAMWDGRDEQMTNEIEDILNDDSEDTYFIVVGSMHLAGENSIPDQ
HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHH
LRDRGYDVESLH
HHHCCCCCCCCC
>Mature Secondary Structure
MDFLGVTRSKVVKILGMLSVLILLTACGPEEAAVDEESKGIFYEVEGGTNQVYLFGSVHV
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCEEEEEECCCCEEEEEEEEEE
GHEDMYPLSPKVEDAFQEADVLGLEIDMAGMTEMEIGQQMATLGMYHDGTKMTDVVSEET
CCCCCCCCCCCHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FEEVADMAVSIGIDRETLNNFKPWYGALIASEIAINEAGLSPEYGIENYFIEQLEDKEME
HHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCHH
TISLETIEDQIGIYNKLSDESQEIYLENTLEEIEYVEEELEELITLWQEGNTEELADIRE
EEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
QQIEESETESIKDYQLAMWDGRDEQMTNEIEDILNDDSEDTYFIVVGSMHLAGENSIPDQ
HHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHH
LRDRGYDVESLH
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]