Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 188584895

GI number: 188584895

Start: 267547

End: 267963

Strand: Direct

Name: trkA [H]

Synonym: Nther_0253

Alternate gene names: 188584895

Gene position: 267547-267963 (Clockwise)

Preceding gene: 188584894

Following gene: 188584896

Centisome position: 8.45

GC content: 31.89

Gene sequence:

>417_bases
ATGAAGAACAGTAATGACTACATCATTATAGTTGGTTGTGGTCGTTTAGGATCATCTTTGGCCAATAACCTTTCTATATC
AAATAAAAGCGTTGTTGTAATTGATTGGAAAGAAAAAGCTTTTAATAATTTGTCAGAAGAGTTTAGTGGCTTTACCATGG
AAGCTAATGTCATCGAAAAAGAGACTCTTATGAATGCCAAGGCAGATCAAGCTGATGTTTTGGTGGCAGTTACAAATGAT
GATAATACAAATATAATGGTAGCAGAAATTGCTAAATCAATATATGAAATACCAAATGTTATAGCAAGGCTATATGACCC
TGCTAGGAAAAGAACGTATGAAGAATTAGATATAAAAACTATTAGTTCCTATGATCTAGTTTCTAAGGCATTTACTGATT
TAATATTGAGCAAATAG

Upstream 100 bases:

>100_bases
ACTAATCTCGAACGTGTAACAAGGTTTAAATACACTAAAGACGGTATAACATTTGGGAATGAGGAAGAAAAAGGAGAGGA
AGAACAAGGAGAGGATAAAA

Downstream 100 bases:

>100_bases
AGAAGGTTTACTAAATATACCTGGAGGGTTTAGAGATGAAGATTATTTTAGTTGGTGGAGGAAATAAAGTACACTATCTT
GCTAAAACATTTATTTCTCA

Product: TrkA-N domain protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MKNSNDYIIIVGCGRLGSSLANNLSISNKSVVVIDWKEKAFNNLSEEFSGFTMEANVIEKETLMNAKADQADVLVAVTND
DNTNIMVAEIAKSIYEIPNVIARLYDPARKRTYEELDIKTISSYDLVSKAFTDLILSK

Sequences:

>Translated_138_residues
MKNSNDYIIIVGCGRLGSSLANNLSISNKSVVVIDWKEKAFNNLSEEFSGFTMEANVIEKETLMNAKADQADVLVAVTND
DNTNIMVAEIAKSIYEIPNVIARLYDPARKRTYEELDIKTISSYDLVSKAFTDLILSK
>Mature_138_residues
MKNSNDYIIIVGCGRLGSSLANNLSISNKSVVVIDWKEKAFNNLSEEFSGFTMEANVIEKETLMNAKADQADVLVAVTND
DNTNIMVAEIAKSIYEIPNVIARLYDPARKRTYEELDIKTISSYDLVSKAFTDLILSK

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=109, Percent_Identity=35.7798165137615, Blast_Score=72, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 15360; Mature: 15360

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSNDYIIIVGCGRLGSSLANNLSISNKSVVVIDWKEKAFNNLSEEFSGFTMEANVIEK
CCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCEEEECCHHHH
ETLMNAKADQADVLVAVTNDDNTNIMVAEIAKSIYEIPNVIARLYDPARKRTYEELDIKT
HHHHCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEE
ISSYDLVSKAFTDLILSK
CCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKNSNDYIIIVGCGRLGSSLANNLSISNKSVVVIDWKEKAFNNLSEEFSGFTMEANVIEK
CCCCCCEEEEEECCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHCCEEEECCHHHH
ETLMNAKADQADVLVAVTNDDNTNIMVAEIAKSIYEIPNVIARLYDPARKRTYEELDIKT
HHHHCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCEEE
ISSYDLVSKAFTDLILSK
CCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953; 2294088 [H]