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The map label for this gene is tnsC [H]

Identifier: 188584889

GI number: 188584889

Start: 258938

End: 260626

Strand: Direct

Name: tnsC [H]

Synonym: Nther_0247

Alternate gene names: 188584889

Gene position: 258938-260626 (Clockwise)

Preceding gene: 188584888

Following gene: 188584890

Centisome position: 8.18

GC content: 32.92

Gene sequence:

>1689_bases
ATGAGCGTAGAAAAAAATAGGACAGTTGATGTTTTTGAGTATAAAACAGCACATTATACGCCTCAGAAGATAAAAGATTA
TGCGGGGAACCCACTAATTGAAGCACTACCACCTATTCTTGAAACCGATGAAGAAGTTATAGATATGTTATATAGTTTAC
CTTCAATTGATGATCATGAAAGAAATTTGTCGCCGTTATTAAAAACTCATGTAATAAAAAGAGTTAAGCGTTTTATTCAA
CCTCTACCTATTCACATTAACCTAGAGTCGAAAATTTCAGTATTAATAAGACAGTCTTACTTATCAAGAAATCCCTTAAC
ACCTGAATACAAGAAGCGCATTAAATTGTTACATACTCTAAAAAAAGAGGAAGAAATAACTCCCGATGAAGTTGAAAGCC
ATTATCGTTCTTATAGTTCTACAGCTGAATGCCTTTTTATTAATGGAGTATCTGGCATGGGTAAAACTACTGCTGTTAAC
AGAATATTGGAACAGTACCCACAGATAATCAAGCACACTGAATATAAAGGGCAGAAGATAACAACTACACAAATAGTTTG
GCTTAAAATTGATAGTCCTTATGATGGTAGCTTTATGACTTTATGTAGAAATATATTTCAGGAGATCGATAAGTTATTAG
GAACCAGGTGGATGGAAAAGTATGGATACTTTACAAGATCTACTTCAACGATGGTCATGTACCTAACTACTTTGTTAGCC
AACTATAATGTAGGGTTATTAGTGATTGATGAGATTCAAAATATTTATAGAGCAAAAAAGAATGATCCTATGGAGATGTT
AGACTATTTTGTTACGTTAACTAATGTGATTTCTGTTCCAATACTGATTATCGGTACAAATCGTGCGAGAAACTTGTTTC
AGGATAATTTCCGACTTGCTAGAAGAGTACAATCTGACGGGTATATAGAAATTGCAAATCTCAAAAAAGATAGTCCCGAC
TGGGAAATTTTTATAGAATCTTTATGGGAATTTAATGTGTTAGAAAACCAGGGTCCTCTTACGGATGAATTAAATGATAC
TTTTTATGAATTATGTCAGGGTGTAATAGCTGTTGCAGTGATGTTACTAATGTTTTCCCAAAACAGGGCAATAAGTGAGG
GCAAAAAGTCACTAACAACTGATATTATTAAGAAGACTTATAAAGAAGATTTGCAATTAATAAGACCAATGATTGAAGCG
TTACGGTCTGGAGACCCATTTGAGATAGCGAAATTTGATGATATTACAATAGATGAGGAGAAAATTCTAAGCAACTATCA
TAAAGATATTGCTATGACTGAAAGTGTACAAGCGGCTATACGTCAGAAAAAAGATAAGATAGAATCTACCCGGGAAAGTA
TAAATGAGAAACTGTTTTTTGAGTTCAGTGCTTCAGGTTTTTTTAATGATATTAAACAAGAAGTGATGAAAAAAATAATT
AACAAGGTTGTAGAAAGCTCAGATGTCGCTACTGAATATGAGGATTTAAAAGAGCTAGTAATGGAGCTTTTACAGAAAGA
AAAAAGAAAGGTTAAGAAAAAACCTCGAAGAAAGAATATCAATCCTGATAATGTCACTTTGATCTCATTATATGATAGTG
CAATAGATAAAAGCCAACATCCCTATGATGCTTTTAAGAGGGAAAAGTTAATAAAAGATCCACTAGATGAATTTCTGAGG
GTGGATTAA

Upstream 100 bases:

>100_bases
ATTGTTTCTATAGAAGAGGAATTAAAAGAACCAAATAATGGCAGTGAAGGGTCAAAATCAGGTAATAGTGAAGTTTATGA
CTTAATAAGGAGGCGTAGGG

Downstream 100 bases:

>100_bases
CAGTATGCTTACTTTTTTTACTGACCCCTATAAAGATGAACTACTTTATTCTGCTTTTGCTAGATATCATTTTTTGTCTG
GAAATATTGATTTAAAGGAT

Product: AAA ATPase

Products: NA

Alternate protein names: Protein E [H]

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSVEKNRTVDVFEYKTAHYTPQKIKDYAGNPLIEALPPILETDEEVIDMLYSLPSIDDHERNLSPLLKTHVIKRVKRFIQ
PLPIHINLESKISVLIRQSYLSRNPLTPEYKKRIKLLHTLKKEEEITPDEVESHYRSYSSTAECLFINGVSGMGKTTAVN
RILEQYPQIIKHTEYKGQKITTTQIVWLKIDSPYDGSFMTLCRNIFQEIDKLLGTRWMEKYGYFTRSTSTMVMYLTTLLA
NYNVGLLVIDEIQNIYRAKKNDPMEMLDYFVTLTNVISVPILIIGTNRARNLFQDNFRLARRVQSDGYIEIANLKKDSPD
WEIFIESLWEFNVLENQGPLTDELNDTFYELCQGVIAVAVMLLMFSQNRAISEGKKSLTTDIIKKTYKEDLQLIRPMIEA
LRSGDPFEIAKFDDITIDEEKILSNYHKDIAMTESVQAAIRQKKDKIESTRESINEKLFFEFSASGFFNDIKQEVMKKII
NKVVESSDVATEYEDLKELVMELLQKEKRKVKKKPRRKNINPDNVTLISLYDSAIDKSQHPYDAFKREKLIKDPLDEFLR
VD

Sequences:

>Translated_562_residues
MSVEKNRTVDVFEYKTAHYTPQKIKDYAGNPLIEALPPILETDEEVIDMLYSLPSIDDHERNLSPLLKTHVIKRVKRFIQ
PLPIHINLESKISVLIRQSYLSRNPLTPEYKKRIKLLHTLKKEEEITPDEVESHYRSYSSTAECLFINGVSGMGKTTAVN
RILEQYPQIIKHTEYKGQKITTTQIVWLKIDSPYDGSFMTLCRNIFQEIDKLLGTRWMEKYGYFTRSTSTMVMYLTTLLA
NYNVGLLVIDEIQNIYRAKKNDPMEMLDYFVTLTNVISVPILIIGTNRARNLFQDNFRLARRVQSDGYIEIANLKKDSPD
WEIFIESLWEFNVLENQGPLTDELNDTFYELCQGVIAVAVMLLMFSQNRAISEGKKSLTTDIIKKTYKEDLQLIRPMIEA
LRSGDPFEIAKFDDITIDEEKILSNYHKDIAMTESVQAAIRQKKDKIESTRESINEKLFFEFSASGFFNDIKQEVMKKII
NKVVESSDVATEYEDLKELVMELLQKEKRKVKKKPRRKNINPDNVTLISLYDSAIDKSQHPYDAFKREKLIKDPLDEFLR
VD
>Mature_561_residues
SVEKNRTVDVFEYKTAHYTPQKIKDYAGNPLIEALPPILETDEEVIDMLYSLPSIDDHERNLSPLLKTHVIKRVKRFIQP
LPIHINLESKISVLIRQSYLSRNPLTPEYKKRIKLLHTLKKEEEITPDEVESHYRSYSSTAECLFINGVSGMGKTTAVNR
ILEQYPQIIKHTEYKGQKITTTQIVWLKIDSPYDGSFMTLCRNIFQEIDKLLGTRWMEKYGYFTRSTSTMVMYLTTLLAN
YNVGLLVIDEIQNIYRAKKNDPMEMLDYFVTLTNVISVPILIIGTNRARNLFQDNFRLARRVQSDGYIEIANLKKDSPDW
EIFIESLWEFNVLENQGPLTDELNDTFYELCQGVIAVAVMLLMFSQNRAISEGKKSLTTDIIKKTYKEDLQLIRPMIEAL
RSGDPFEIAKFDDITIDEEKILSNYHKDIAMTESVQAAIRQKKDKIESTRESINEKLFFEFSASGFFNDIKQEVMKKIIN
KVVESSDVATEYEDLKELVMELLQKEKRKVKKKPRRKNINPDNVTLISLYDSAIDKSQHPYDAFKREKLIKDPLDEFLRV
D

Specific function: TnsABC + tnsD promote high-frequency insertion of Tn7 into a specific target site known as att-Tn7 whereas tnsABC + tnsE promote low-frequency insertion into many different sites [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959
- InterPro:   IPR021542 [H]

Pfam domain/function: PF00004 AAA; PF11426 Tn7_TnsC [H]

EC number: NA

Molecular weight: Translated: 65472; Mature: 65341

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEKNRTVDVFEYKTAHYTPQKIKDYAGNPLIEALPPILETDEEVIDMLYSLPSIDDHE
CCCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHCCCCCCCC
RNLSPLLKTHVIKRVKRFIQPLPIHINLESKISVLIRQSYLSRNPLTPEYKKRIKLLHTL
CHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
KKEEEITPDEVESHYRSYSSTAECLFINGVSGMGKTTAVNRILEQYPQIIKHTEYKGQKI
HHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
TTTQIVWLKIDSPYDGSFMTLCRNIFQEIDKLLGTRWMEKYGYFTRSTSTMVMYLTTLLA
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH
NYNVGLLVIDEIQNIYRAKKNDPMEMLDYFVTLTNVISVPILIIGTNRARNLFQDNFRLA
CCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHH
RRVQSDGYIEIANLKKDSPDWEIFIESLWEFNVLENQGPLTDELNDTFYELCQGVIAVAV
HHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
MLLMFSQNRAISEGKKSLTTDIIKKTYKEDLQLIRPMIEALRSGDPFEIAKFDDITIDEE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHH
KILSNYHKDIAMTESVQAAIRQKKDKIESTRESINEKLFFEFSASGFFNDIKQEVMKKII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH
NKVVESSDVATEYEDLKELVMELLQKEKRKVKKKPRRKNINPDNVTLISLYDSAIDKSQH
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCC
PYDAFKREKLIKDPLDEFLRVD
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVEKNRTVDVFEYKTAHYTPQKIKDYAGNPLIEALPPILETDEEVIDMLYSLPSIDDHE
CCCCCCCEEEEECCCCCCCHHHHHHHCCCCHHHHCCCHHCCCHHHHHHHHHCCCCCCCC
RNLSPLLKTHVIKRVKRFIQPLPIHINLESKISVLIRQSYLSRNPLTPEYKKRIKLLHTL
CHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
KKEEEITPDEVESHYRSYSSTAECLFINGVSGMGKTTAVNRILEQYPQIIKHTEYKGQKI
HHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE
TTTQIVWLKIDSPYDGSFMTLCRNIFQEIDKLLGTRWMEKYGYFTRSTSTMVMYLTTLLA
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHH
NYNVGLLVIDEIQNIYRAKKNDPMEMLDYFVTLTNVISVPILIIGTNRARNLFQDNFRLA
CCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHH
RRVQSDGYIEIANLKKDSPDWEIFIESLWEFNVLENQGPLTDELNDTFYELCQGVIAVAV
HHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
MLLMFSQNRAISEGKKSLTTDIIKKTYKEDLQLIRPMIEALRSGDPFEIAKFDDITIDEE
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHH
KILSNYHKDIAMTESVQAAIRQKKDKIESTRESINEKLFFEFSASGFFNDIKQEVMKKII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHH
NKVVESSDVATEYEDLKELVMELLQKEKRKVKKKPRRKNINPDNVTLISLYDSAIDKSQH
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHCCCCC
PYDAFKREKLIKDPLDEFLRVD
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2156235; 3022239; 1655576; 1317955 [H]