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The map label for this gene is 188584880

Identifier: 188584880

GI number: 188584880

Start: 247183

End: 247725

Strand: Direct

Name: 188584880

Synonym: Nther_0238

Alternate gene names: NA

Gene position: 247183-247725 (Clockwise)

Preceding gene: 188584879

Following gene: 188584881

Centisome position: 7.81

GC content: 38.49

Gene sequence:

>543_bases
GTGAGTTCCAATAAAGAAAGCCAATTGGCCCTTTATCTTGCCAGGGAAGGGTTAAAACATTATCTAAGGTATGAAAAATA
TTTGGAACCTCCAGAGGAGATGCCTCCCCTCTTTTATACAAAAAGAGGCACTTTCGTGTCACTAAAAGAAAAAGATGATA
ATCTCAGGGGATGTATTGGTACTTTAGAAGCTACACAAAACAACTTAGCCCAGGAGATAATTCAAAATGCTGTAAGTGCC
GGTGTAAGGGATCCTAGATTTCCCCCTGTAAAATTAACAGAATTGGATGATATAAAGGTTTCCGTTGACATAATCTCTCC
CTTGGAAAAAGTTTCAGGGTTAGATCAGCTAGATCCTAGTAAATATGGTTTGGTTGTTGAAAAAGGTTATCGAAGGGGTG
TGCTATTACCGGATCTTGAGGGAATAAATACTCCTAAAGAACAATTAGCCATCTCAGCCCAAAAAGCTGGACTATCACCA
AGTGATTCAAATTTAACACTTTACAGGTTTGAGGTGACTAGATTTCATGAAACTGCCTCATAA

Upstream 100 bases:

>100_bases
ATCTAAATTTAAGCGACAAACAAGTTTTATCTTATGAAGGCCCCTTTGGGGTAGGATATTTGGTTGCTAGATTATTTTAA
AACGAGGAGGTATGAAGCCA

Downstream 100 bases:

>100_bases
TCTGTTTCGAGATAAAAAGGGTGAATTTGTAAATTGTCATCTTTGTTTTCGTCGGTGCTTGTTAAAAGAAGGTGAGTTAG
GATTTTGTGGCAATCGCAAA

Product: AMMECR1 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSSNKESQLALYLAREGLKHYLRYEKYLEPPEEMPPLFYTKRGTFVSLKEKDDNLRGCIGTLEATQNNLAQEIIQNAVSA
GVRDPRFPPVKLTELDDIKVSVDIISPLEKVSGLDQLDPSKYGLVVEKGYRRGVLLPDLEGINTPKEQLAISAQKAGLSP
SDSNLTLYRFEVTRFHETAS

Sequences:

>Translated_180_residues
MSSNKESQLALYLAREGLKHYLRYEKYLEPPEEMPPLFYTKRGTFVSLKEKDDNLRGCIGTLEATQNNLAQEIIQNAVSA
GVRDPRFPPVKLTELDDIKVSVDIISPLEKVSGLDQLDPSKYGLVVEKGYRRGVLLPDLEGINTPKEQLAISAQKAGLSP
SDSNLTLYRFEVTRFHETAS
>Mature_179_residues
SSNKESQLALYLAREGLKHYLRYEKYLEPPEEMPPLFYTKRGTFVSLKEKDDNLRGCIGTLEATQNNLAQEIIQNAVSAG
VRDPRFPPVKLTELDDIKVSVDIISPLEKVSGLDQLDPSKYGLVVEKGYRRGVLLPDLEGINTPKEQLAISAQKAGLSPS
DSNLTLYRFEVTRFHETAS

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 20184; Mature: 20053

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNKESQLALYLAREGLKHYLRYEKYLEPPEEMPPLFYTKRGTFVSLKEKDDNLRGCIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCEEEEECCCCCHHHHHH
TLEATQNNLAQEIIQNAVSAGVRDPRFPPVKLTELDDIKVSVDIISPLEKVSGLDQLDPS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCCCCCC
KYGLVVEKGYRRGVLLPDLEGINTPKEQLAISAQKAGLSPSDSNLTLYRFEVTRFHETAS
CCCEEEECCCCCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCCCCEEEEEEEEEECCCCCC
>Mature Secondary Structure 
SSNKESQLALYLAREGLKHYLRYEKYLEPPEEMPPLFYTKRGTFVSLKEKDDNLRGCIG
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCEEEEECCCCCHHHHHH
TLEATQNNLAQEIIQNAVSAGVRDPRFPPVKLTELDDIKVSVDIISPLEKVSGLDQLDPS
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEEHHHHHHHHHCCCCCCCCC
KYGLVVEKGYRRGVLLPDLEGINTPKEQLAISAQKAGLSPSDSNLTLYRFEVTRFHETAS
CCCEEEECCCCCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCCCCEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]