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The map label for this gene is 188584879

Identifier: 188584879

GI number: 188584879

Start: 246356

End: 247162

Strand: Direct

Name: 188584879

Synonym: Nther_0237

Alternate gene names: NA

Gene position: 246356-247162 (Clockwise)

Preceding gene: 188584878

Following gene: 188584880

Centisome position: 7.78

GC content: 37.42

Gene sequence:

>807_bases
ATGTTAAAGTGGGCAATTTTTTCTCCTCACCCTCCCCTATTAATTCCTGAAATAGGTAAACAAATGCTAAGTCAAGTCGA
AAAGACTAAAAATAGTTTAGAACAAGTTTTTGCTAAGGTTCATAATGTAGATACTATTATTGTAATAACCCCCCACGGTT
TTGCAAGTGAAAATGCCATAACATGCTATCAGACCGATATGTTGAACGGGGCTTTAACAGATTTCAGTGGGGGGTGCCCT
GTCATTGAGTTGACTGTAGATCAAGACTTAAATGAAATGATTAACCAAACTGCTGATAACCAAAATATAGACGTAAATTG
GATCACTAAAAATAGCTTAAAATTCAGTGAAGAACTACTAGATCATGGTAGCTATGTACCTTTGTATTACGCTCTTAAAA
ACTTGACTTCAACCCCAAGAATAGTAGTTATAAATCCTGGATTTGTAACCATTGATGCACTGTGGCAGTTTGGTGAAGCT
TTACAGTCCCAATTGGCAGATACTAAAAAAGATATCGGTTTAATTATCAGCGGGGATCTTTCCCATCGATTAACTCAGGG
AGCTCCTGCTGGCTACCATCCAGAAGCGTATAAATTCGATCAGGAAATAAAAGATATAATCGAGCAAGGCCCATTATCAC
GATTGAAAAAGCTTTCTTCACAACTGCTTAGTACAGCAGGAGAATGTGGCTATCGTCCTTTGATCTTGGGTAGCGGGATG
TTAGATAATCTAAATTTAAGCGACAAACAAGTTTTATCTTATGAAGGCCCCTTTGGGGTAGGATATTTGGTTGCTAGATT
ATTTTAA

Upstream 100 bases:

>100_bases
ACCGGACCGGTGATTTGGCTGTAGAGTTAGTAGCTTCGGCTTTAGGTGAACGTGTATTATAAAGTTGTGTTTATTAACTA
ATTTTGTAGGAGGGAATTAT

Downstream 100 bases:

>100_bases
AACGAGGAGGTATGAAGCCAGTGAGTTCCAATAAAGAAAGCCAATTGGCCCTTTATCTTGCCAGGGAAGGGTTAAAACAT
TATCTAAGGTATGAAAAATA

Product: Extradiol ring-cleavage dioxygenase class III protein subunit B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLKWAIFSPHPPLLIPEIGKQMLSQVEKTKNSLEQVFAKVHNVDTIIVITPHGFASENAITCYQTDMLNGALTDFSGGCP
VIELTVDQDLNEMINQTADNQNIDVNWITKNSLKFSEELLDHGSYVPLYYALKNLTSTPRIVVINPGFVTIDALWQFGEA
LQSQLADTKKDIGLIISGDLSHRLTQGAPAGYHPEAYKFDQEIKDIIEQGPLSRLKKLSSQLLSTAGECGYRPLILGSGM
LDNLNLSDKQVLSYEGPFGVGYLVARLF

Sequences:

>Translated_268_residues
MLKWAIFSPHPPLLIPEIGKQMLSQVEKTKNSLEQVFAKVHNVDTIIVITPHGFASENAITCYQTDMLNGALTDFSGGCP
VIELTVDQDLNEMINQTADNQNIDVNWITKNSLKFSEELLDHGSYVPLYYALKNLTSTPRIVVINPGFVTIDALWQFGEA
LQSQLADTKKDIGLIISGDLSHRLTQGAPAGYHPEAYKFDQEIKDIIEQGPLSRLKKLSSQLLSTAGECGYRPLILGSGM
LDNLNLSDKQVLSYEGPFGVGYLVARLF
>Mature_268_residues
MLKWAIFSPHPPLLIPEIGKQMLSQVEKTKNSLEQVFAKVHNVDTIIVITPHGFASENAITCYQTDMLNGALTDFSGGCP
VIELTVDQDLNEMINQTADNQNIDVNWITKNSLKFSEELLDHGSYVPLYYALKNLTSTPRIVVINPGFVTIDALWQFGEA
LQSQLADTKKDIGLIISGDLSHRLTQGAPAGYHPEAYKFDQEIKDIIEQGPLSRLKKLSSQLLSTAGECGYRPLILGSGM
LDNLNLSDKQVLSYEGPFGVGYLVARLF

Specific function: Unknown

COG id: COG3885

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733
- InterPro:   IPR004183 [H]

Pfam domain/function: PF01871 AMMECR1; PF02900 LigB [H]

EC number: NA

Molecular weight: Translated: 29626; Mature: 29626

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKWAIFSPHPPLLIPEIGKQMLSQVEKTKNSLEQVFAKVHNVDTIIVITPHGFASENAI
CCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE
TCYQTDMLNGALTDFSGGCPVIELTVDQDLNEMINQTADNQNIDVNWITKNSLKFSEELL
EEEEHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH
DHGSYVPLYYALKNLTSTPRIVVINPGFVTIDALWQFGEALQSQLADTKKDIGLIISGDL
HCCCCCHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCH
SHRLTQGAPAGYHPEAYKFDQEIKDIIEQGPLSRLKKLSSQLLSTAGECGYRPLILGSGM
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
LDNLNLSDKQVLSYEGPFGVGYLVARLF
CCCCCCCCCCEEECCCCCHHHHHHHHHC
>Mature Secondary Structure
MLKWAIFSPHPPLLIPEIGKQMLSQVEKTKNSLEQVFAKVHNVDTIIVITPHGFASENAI
CCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCE
TCYQTDMLNGALTDFSGGCPVIELTVDQDLNEMINQTADNQNIDVNWITKNSLKFSEELL
EEEEHHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHH
DHGSYVPLYYALKNLTSTPRIVVINPGFVTIDALWQFGEALQSQLADTKKDIGLIISGDL
HCCCCCHHHHHHHHCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHCCCEEEECCH
SHRLTQGAPAGYHPEAYKFDQEIKDIIEQGPLSRLKKLSSQLLSTAGECGYRPLILGSGM
HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCC
LDNLNLSDKQVLSYEGPFGVGYLVARLF
CCCCCCCCCCEEECCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]