| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is gltX
Identifier: 188584810
GI number: 188584810
Start: 191302
End: 192768
Strand: Direct
Name: gltX
Synonym: Nther_0168
Alternate gene names: 188584810
Gene position: 191302-192768 (Clockwise)
Preceding gene: 188584809
Following gene: 188584812
Centisome position: 6.04
GC content: 37.7
Gene sequence:
>1467_bases TTGACTAATAAAGCGAGGTTGCGATTTGCTCCAAGCCCTACTGGACAGATCCATATCGGCAACATTCGTACCGCATTATT TAACTGGTTGTACTCTAGACATATTGATGGAGAATTTATATTAAGAGTAGAAGATACTGATATGAACAGATCAGTTGAAG AATACGAACAGATAATCTTTAGAGCGTTAAGTTGGCTGGGATTAGATTGGGATGAAGGCCCCCAAAAAGGTGGAGATTTC GGTCCCTACAGACAGAGTGAGAGAAAAGATATTTATCACAAATATGCCAATAAATTATTAGAAGCTGGAAAGGCTTATTA TTGCTACTGTACCGAAGAAGAGCTGGAAGAGATGAGAGAAGCTCAGAGGGCTAGAGGTGAAATGCCTAGATATAGCGGCA AATGTGCCGATCTCAGCTCCGAGGAACGAGCAGAATTAGAAAATGAAGGGCGTAAGTCAGTGATTAGATTTAAAGTTCCA GAAAATCAGACTATTCGTGTAAACGATCTGGTAAAAGGTGAAGTAGACTTTGAAAGTGATGGGATCGGAGATTTTATATT AATAAAAAGTGATGACATGGCTTCATATAATTTTGCATGTGTAGTTGATGATTACTTAATGAACATTACCCATGTTTTAA GGGGAGAAGATCACCTTTCCAATACTCCCAAACAAGTAATGATTTATGAGGCTCTGGGCTTTGAGACTCCTGAATTTGGA CATTTATCTTTGATTTTAGGTCCTGATAAAGCAAAACTAAGTAAACGTCATGGTGACACCTTTATAGGGGAATATCGAGA AAAAGGTTATCTACCTGAAGCAATGGTAAACTTTTTAGCTTTATTAGGTTGGTCTCCGCCTGGAGAAGATGAACTTTTTA CCCAAGATGAACTAATTAGATTATTTGATATAGGTAGAGTTTCGAAAAGTGCCGCAGTCTTTGATGTGGATAAATTAAAT TGGATGAACTCACACTATATTAAAGAGGCGGATACAGAAAGATTGCTTAACCTTTCTAAAGAATATTTAATTAATTCCGA CCTAGTGTCGCAAGAACAGTTAGAGCACGATTGGGAATGGTTCGTTTCTGCTGTGGATTTAGTCAAGGAAAAAATTGATA TGCTATCGGAATTACCTCCACAGTTAAAAATCTTTTATGGAGACGATGTAGACCTTAAAGGTGAGGAAGTAGAATTTTTA GAGAAGGACCACGTTCCTGAATTACTTTCAGAAGTTATTAATCAATTTAATGATTTAGACTCCTTTGAGGATCCTAAAGC TATCAAGAAAGCAGTTAATAAAGCCGGTAAGCAGGTTGGTGTCAAAGGTAAGCAGCTTTTTATGCCTGTAAGAATTGCAG TGAGTGGACAAATGCACGGCCCTGAGCTTGATCAGCTAATTTCTTTATTGGGCCGAGAACGAGCGATTAATAGAGTGAAT AGCACTCTTTCACAAATTCAAAGTTAA
Upstream 100 bases:
>100_bases TTTTAAATTGATGGCTGCTGTATTAAAGTTGAATGTTGATAACTGAAATTTCAATTTCAAAACTAAACAGCGCCAAATTG AAAAAGAGGGGGAATACCAA
Downstream 100 bases:
>100_bases AATATTGACAAGAGGTATGTAATAGTTTATATTCATAAATAATAATTATTATTGACATAAAAACGAACTGAATCTAAGAT AATTTTATGCGGAGGAATCA
Product: glutamate--tRNA(Gln) ligase, glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MTNKARLRFAPSPTGQIHIGNIRTALFNWLYSRHIDGEFILRVEDTDMNRSVEEYEQIIFRALSWLGLDWDEGPQKGGDF GPYRQSERKDIYHKYANKLLEAGKAYYCYCTEEELEEMREAQRARGEMPRYSGKCADLSSEERAELENEGRKSVIRFKVP ENQTIRVNDLVKGEVDFESDGIGDFILIKSDDMASYNFACVVDDYLMNITHVLRGEDHLSNTPKQVMIYEALGFETPEFG HLSLILGPDKAKLSKRHGDTFIGEYREKGYLPEAMVNFLALLGWSPPGEDELFTQDELIRLFDIGRVSKSAAVFDVDKLN WMNSHYIKEADTERLLNLSKEYLINSDLVSQEQLEHDWEWFVSAVDLVKEKIDMLSELPPQLKIFYGDDVDLKGEEVEFL EKDHVPELLSEVINQFNDLDSFEDPKAIKKAVNKAGKQVGVKGKQLFMPVRIAVSGQMHGPELDQLISLLGRERAINRVN STLSQIQS
Sequences:
>Translated_488_residues MTNKARLRFAPSPTGQIHIGNIRTALFNWLYSRHIDGEFILRVEDTDMNRSVEEYEQIIFRALSWLGLDWDEGPQKGGDF GPYRQSERKDIYHKYANKLLEAGKAYYCYCTEEELEEMREAQRARGEMPRYSGKCADLSSEERAELENEGRKSVIRFKVP ENQTIRVNDLVKGEVDFESDGIGDFILIKSDDMASYNFACVVDDYLMNITHVLRGEDHLSNTPKQVMIYEALGFETPEFG HLSLILGPDKAKLSKRHGDTFIGEYREKGYLPEAMVNFLALLGWSPPGEDELFTQDELIRLFDIGRVSKSAAVFDVDKLN WMNSHYIKEADTERLLNLSKEYLINSDLVSQEQLEHDWEWFVSAVDLVKEKIDMLSELPPQLKIFYGDDVDLKGEEVEFL EKDHVPELLSEVINQFNDLDSFEDPKAIKKAVNKAGKQVGVKGKQLFMPVRIAVSGQMHGPELDQLISLLGRERAINRVN STLSQIQS >Mature_487_residues TNKARLRFAPSPTGQIHIGNIRTALFNWLYSRHIDGEFILRVEDTDMNRSVEEYEQIIFRALSWLGLDWDEGPQKGGDFG PYRQSERKDIYHKYANKLLEAGKAYYCYCTEEELEEMREAQRARGEMPRYSGKCADLSSEERAELENEGRKSVIRFKVPE NQTIRVNDLVKGEVDFESDGIGDFILIKSDDMASYNFACVVDDYLMNITHVLRGEDHLSNTPKQVMIYEALGFETPEFGH LSLILGPDKAKLSKRHGDTFIGEYREKGYLPEAMVNFLALLGWSPPGEDELFTQDELIRLFDIGRVSKSAAVFDVDKLNW MNSHYIKEADTERLLNLSKEYLINSDLVSQEQLEHDWEWFVSAVDLVKEKIDMLSELPPQLKIFYGDDVDLKGEEVEFLE KDHVPELLSEVINQFNDLDSFEDPKAIKKAVNKAGKQVGVKGKQLFMPVRIAVSGQMHGPELDQLISLLGRERAINRVNS TLSQIQS
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=517, Percent_Identity=31.1411992263056, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI62241042, Length=267, Percent_Identity=26.5917602996255, Blast_Score=81, Evalue=3e-15, Organism=Escherichia coli, GI1788743, Length=489, Percent_Identity=39.2638036809816, Blast_Score=354, Evalue=7e-99, Organism=Escherichia coli, GI226510925, Length=250, Percent_Identity=32.8, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1786895, Length=212, Percent_Identity=27.8301886792453, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71993394, Length=485, Percent_Identity=34.020618556701, Blast_Score=277, Evalue=1e-74, Organism=Caenorhabditis elegans, GI17511007, Length=276, Percent_Identity=24.2753623188406, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324540, Length=514, Percent_Identity=34.0466926070039, Blast_Score=276, Evalue=7e-75, Organism=Saccharomyces cerevisiae, GI6324742, Length=314, Percent_Identity=26.4331210191083, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6321192, Length=213, Percent_Identity=25.8215962441315, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24665321, Length=501, Percent_Identity=36.3273453093812, Blast_Score=289, Evalue=3e-78,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_NATTJ (B2A4B3)
Other databases:
- EMBL: CP001034 - RefSeq: YP_001916355.1 - ProteinModelPortal: B2A4B3 - SMR: B2A4B3 - GeneID: 6316550 - GenomeReviews: CP001034_GR - KEGG: nth:Nther_0168 - HOGENOM: HBG628189 - OMA: WINNQYV - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 55985; Mature: 55854
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 255-255
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKARLRFAPSPTGQIHIGNIRTALFNWLYSRHIDGEFILRVEDTDMNRSVEEYEQIIF CCCCCEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH RALSWLGLDWDEGPQKGGDFGPYRQSERKDIYHKYANKLLEAGKAYYCYCTEEELEEMRE HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH AQRARGEMPRYSGKCADLSSEERAELENEGRKSVIRFKVPENQTIRVNDLVKGEVDFESD HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEECEEECCCCCCCC GIGDFILIKSDDMASYNFACVVDDYLMNITHVLRGEDHLSNTPKQVMIYEALGFETPEFG CCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCHHHCCCCCCEEEEHHHCCCCCCCC HLSLILGPDKAKLSKRHGDTFIGEYREKGYLPEAMVNFLALLGWSPPGEDELFTQDELIR CEEEEECCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LFDIGRVSKSAAVFDVDKLNWMNSHYIKEADTERLLNLSKEYLINSDLVSQEQLEHDWEW HHHHCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVSAVDLVKEKIDMLSELPPQLKIFYGDDVDLKGEEVEFLEKDHVPELLSEVINQFNDLD HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC SFEDPKAIKKAVNKAGKQVGVKGKQLFMPVRIAVSGQMHGPELDQLISLLGRERAINRVN CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH STLSQIQS HHHHHHCC >Mature Secondary Structure TNKARLRFAPSPTGQIHIGNIRTALFNWLYSRHIDGEFILRVEDTDMNRSVEEYEQIIF CCCCEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH RALSWLGLDWDEGPQKGGDFGPYRQSERKDIYHKYANKLLEAGKAYYCYCTEEELEEMRE HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH AQRARGEMPRYSGKCADLSSEERAELENEGRKSVIRFKVPENQTIRVNDLVKGEVDFESD HHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEECEEECCCCCCCC GIGDFILIKSDDMASYNFACVVDDYLMNITHVLRGEDHLSNTPKQVMIYEALGFETPEFG CCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCHHHCCCCCCEEEEHHHCCCCCCCC HLSLILGPDKAKLSKRHGDTFIGEYREKGYLPEAMVNFLALLGWSPPGEDELFTQDELIR CEEEEECCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH LFDIGRVSKSAAVFDVDKLNWMNSHYIKEADTERLLNLSKEYLINSDLVSQEQLEHDWEW HHHHCCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVSAVDLVKEKIDMLSELPPQLKIFYGDDVDLKGEEVEFLEKDHVPELLSEVINQFNDLD HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCC SFEDPKAIKKAVNKAGKQVGVKGKQLFMPVRIAVSGQMHGPELDQLISLLGRERAINRVN CCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH STLSQIQS HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA