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The map label for this gene is yacL [H]

Identifier: 188584807

GI number: 188584807

Start: 188768

End: 189868

Strand: Direct

Name: yacL [H]

Synonym: Nther_0165

Alternate gene names: 188584807

Gene position: 188768-189868 (Clockwise)

Preceding gene: 188584806

Following gene: 188584808

Centisome position: 5.96

GC content: 38.06

Gene sequence:

>1101_bases
GTGATTCGTCGTACGGTTAGAATATTAATGACAATTATAGGCTTTGTGGCAGGCTATCAACTTTCCTATGGACTGACTAC
TCTAGACGCTGTAAGCGGAATGGACCTTGGTGAATCTACTGTCCTGGGGATAACATTATTAGGTGGAGCTGTTTTAGGAC
TGATATTTTATTTTATTGCCCCTATGATGATGGAACGAGTAATTCAGCTAACTAAATGGATAGAAAGAAAAATGCGTCCA
ATACCTACTAGAGACATTTTGCTGGGTTCCTTTGGTTTGTTGTTGGGTTTGTTACTTGGATATTTGATTAGTATTCCTAT
ATACAGAATTCCTTGGGTTGGAATTTATCTGGCCCTGGCTGTTAATTTGTTCATGGGTTATTTGGGAATTATCCTTACTT
TTAATCGCAAAGAAGAGTTATTAACTTTGATGACTTTTCTTAAGTCAGGTAAAAACGAATATTTTGCTAAGGAAGATCAG
AAGAACAAGTCCACTATTAAGGTTCTTGACACTTCGGTGATCATTGATGGCCGAATCTACGATGTATGTAAAACTGGTTT
TCTAGAGGGGACCATGATGATACCTGAGTTTGTGTTAGAAGAATTGCGTCACATAGCTGACTCTTCGGATCTACTTAAAC
GCAATCGTGGGAGAAGAGGCTTAGATATTTTAAATAAGATGCAAAAGGAAGACTCTATTGATGTAGAAATTTATGAAGGC
GATGTGGATGAATCCGAAGTTGATAGCAAACTAGTGAAACTAGCCAAGGTGATGAGTGGTAAAGTTATCACCAATGACTA
TAACTTAAATAAAGTATCGGAATTACAAGGGGTGCCGGTTTTGAACATCAATGAACTGGCAAATGCAGTTAAACCTGTGG
TATTGCCAGGCGAGGAAATGGCCGTCAAAGTTATAAAAGATGGCAAAGAAGCCGGCCAAGGTGTTGCTTATTTAGATGAC
GGAACTATGATAGTAGTTGATGGCGGAAAGAGACATATTGGAGAAAAATTGGAAGTTATGGTAACAAGTGTACTACAAAC
AGCTGCAGGAAGAATGATATTTGCAAAGCCTAAATATCAATTGGATAAAAGTCATGCATGA

Upstream 100 bases:

>100_bases
AGCTTATTCAAACAAACTTAACTGAATTTACTCGAAATATTGAAAGCTGATTAGTTTTTAGGGTATAATAACTAGACAAG
GCAAAGGAGGTGAAATTTGA

Downstream 100 bases:

>100_bases
GGTGAAAAAGCTTGTGTAATTCAAACTTAAATGTTTCAGTGATTTTACCAGCAGGCGGTCAAGGGTCGAGAATGGGTCAG
TCTATAAATAAACAGTACCT

Product: PilT protein domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MIRRTVRILMTIIGFVAGYQLSYGLTTLDAVSGMDLGESTVLGITLLGGAVLGLIFYFIAPMMMERVIQLTKWIERKMRP
IPTRDILLGSFGLLLGLLLGYLISIPIYRIPWVGIYLALAVNLFMGYLGIILTFNRKEELLTLMTFLKSGKNEYFAKEDQ
KNKSTIKVLDTSVIIDGRIYDVCKTGFLEGTMMIPEFVLEELRHIADSSDLLKRNRGRRGLDILNKMQKEDSIDVEIYEG
DVDESEVDSKLVKLAKVMSGKVITNDYNLNKVSELQGVPVLNINELANAVKPVVLPGEEMAVKVIKDGKEAGQGVAYLDD
GTMIVVDGGKRHIGEKLEVMVTSVLQTAAGRMIFAKPKYQLDKSHA

Sequences:

>Translated_366_residues
MIRRTVRILMTIIGFVAGYQLSYGLTTLDAVSGMDLGESTVLGITLLGGAVLGLIFYFIAPMMMERVIQLTKWIERKMRP
IPTRDILLGSFGLLLGLLLGYLISIPIYRIPWVGIYLALAVNLFMGYLGIILTFNRKEELLTLMTFLKSGKNEYFAKEDQ
KNKSTIKVLDTSVIIDGRIYDVCKTGFLEGTMMIPEFVLEELRHIADSSDLLKRNRGRRGLDILNKMQKEDSIDVEIYEG
DVDESEVDSKLVKLAKVMSGKVITNDYNLNKVSELQGVPVLNINELANAVKPVVLPGEEMAVKVIKDGKEAGQGVAYLDD
GTMIVVDGGKRHIGEKLEVMVTSVLQTAAGRMIFAKPKYQLDKSHA
>Mature_366_residues
MIRRTVRILMTIIGFVAGYQLSYGLTTLDAVSGMDLGESTVLGITLLGGAVLGLIFYFIAPMMMERVIQLTKWIERKMRP
IPTRDILLGSFGLLLGLLLGYLISIPIYRIPWVGIYLALAVNLFMGYLGIILTFNRKEELLTLMTFLKSGKNEYFAKEDQ
KNKSTIKVLDTSVIIDGRIYDVCKTGFLEGTMMIPEFVLEELRHIADSSDLLKRNRGRRGLDILNKMQKEDSIDVEIYEG
DVDESEVDSKLVKLAKVMSGKVITNDYNLNKVSELQGVPVLNINELANAVKPVVLPGEEMAVKVIKDGKEAGQGVAYLDD
GTMIVVDGGKRHIGEKLEVMVTSVLQTAAGRMIFAKPKYQLDKSHA

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40703; Mature: 40703

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRTVRILMTIIGFVAGYQLSYGLTTLDAVSGMDLGESTVLGITLLGGAVLGLIFYFIA
CCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
PMMMERVIQLTKWIERKMRPIPTRDILLGSFGLLLGLLLGYLISIPIYRIPWVGIYLALA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VNLFMGYLGIILTFNRKEELLTLMTFLKSGKNEYFAKEDQKNKSTIKVLDTSVIIDGRIY
HHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHH
DVCKTGFLEGTMMIPEFVLEELRHIADSSDLLKRNRGRRGLDILNKMQKEDSIDVEIYEG
HHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
DVDESEVDSKLVKLAKVMSGKVITNDYNLNKVSELQGVPVLNINELANAVKPVVLPGEEM
CCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCEEHHHHHHHHCCEEECCHHH
AVKVIKDGKEAGQGVAYLDDGTMIVVDGGKRHIGEKLEVMVTSVLQTAAGRMIFAKPKYQ
HHHHHHCCHHHCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
LDKSHA
CCCCCC
>Mature Secondary Structure
MIRRTVRILMTIIGFVAGYQLSYGLTTLDAVSGMDLGESTVLGITLLGGAVLGLIFYFIA
CCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
PMMMERVIQLTKWIERKMRPIPTRDILLGSFGLLLGLLLGYLISIPIYRIPWVGIYLALA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VNLFMGYLGIILTFNRKEELLTLMTFLKSGKNEYFAKEDQKNKSTIKVLDTSVIIDGRIY
HHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEECCHHH
DVCKTGFLEGTMMIPEFVLEELRHIADSSDLLKRNRGRRGLDILNKMQKEDSIDVEIYEG
HHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEC
DVDESEVDSKLVKLAKVMSGKVITNDYNLNKVSELQGVPVLNINELANAVKPVVLPGEEM
CCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHCCCCCEEHHHHHHHHCCEEECCHHH
AVKVIKDGKEAGQGVAYLDDGTMIVVDGGKRHIGEKLEVMVTSVLQTAAGRMIFAKPKYQ
HHHHHHCCHHHCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
LDKSHA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]