Click here to switch to the map view.

The map label for this gene is sspF [H]

Identifier: 188584799

GI number: 188584799

Start: 181788

End: 181979

Strand: Direct

Name: sspF [H]

Synonym: Nther_0157

Alternate gene names: 188584799

Gene position: 181788-181979 (Clockwise)

Preceding gene: 188584797

Following gene: 188584800

Centisome position: 5.74

GC content: 45.31

Gene sequence:

>192_bases
ATGGCACGTAGGCGAAATAGAGGTGTCATGAGTGAAGAGCTGAAGTATGAACTGGCCAAAGAGCTGGGAGTTTTTGATAC
AGTGGCCCGAGAAGGTTGGGGAAGTGTTCCATCTCGAGATTGTGGGAACTTAACCAAGTTGGCCATTGAAAAAGCTGAAC
AGATGATGCGAGATCAAAATCAAGGGTTTTAA

Upstream 100 bases:

>100_bases
ATACTCTATAGCGTAAAATTACCTATATTATCCTGAGCTTGTTCAGCACAAACTAAAAATAGCCTTAAAACCCTTTAAAT
TTAATGGAGGTGTCGCTCTA

Downstream 100 bases:

>100_bases
GGCAAGGATGAATAAACCCAGACGAACTGGGTTAAGATAGTAATGAAGGCAGGTTAACTCCTCTCCCTTTAACAATATCA
TGCCTTCCCAGGCAAGCGGC

Product: small, acid-soluble spore protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MARRRNRGVMSEELKYELAKELGVFDTVAREGWGSVPSRDCGNLTKLAIEKAEQMMRDQNQGF

Sequences:

>Translated_63_residues
MARRRNRGVMSEELKYELAKELGVFDTVAREGWGSVPSRDCGNLTKLAIEKAEQMMRDQNQGF
>Mature_62_residues
ARRRNRGVMSEELKYELAKELGVFDTVAREGWGSVPSRDCGNLTKLAIEKAEQMMRDQNQGF

Specific function: May play some important role in either sporulation or the dormant spore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 7205; Mature: 7074

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00304 SASP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRRNRGVMSEELKYELAKELGVFDTVAREGWGSVPSRDCGNLTKLAIEKAEQMMRDQN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QGF
CCC
>Mature Secondary Structure 
ARRRNRGVMSEELKYELAKELGVFDTVAREGWGSVPSRDCGNLTKLAIEKAEQMMRDQN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC
QGF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6205155; 7584024; 9384377 [H]