Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528371

Identifier: 188528371

GI number: 188528371

Start: 1600425

End: 1601021

Strand: Reverse

Name: 188528371

Synonym: HPSH_08225

Alternate gene names: NA

Gene position: 1601021-1600425 (Counterclockwise)

Preceding gene: 188528372

Following gene: 188528370

Centisome position: 99.53

GC content: 47.4

Gene sequence:

>597_bases
ATGAAAAAACTCAAAGGTCTTTTTTTGAGCCTACTCTTATGGGTCTATCCTTTAAGGAGTGAGCCGATCAATGAGGGGGC
ATACATTTTAGAAGAGATCGGCGATGTGCTTAGGTTTTTGCCTATTTTTGTAGGCACGGTCAGTTTGGCGATGCGCGATT
ATAGAGGTTTAGGGGAATTAGCGGTCGGCACATTGGTTACTCAAGGAGTGATTTATGGCCTTAAAGGAGCTTTTAGCACC
GCCCATAAAGATGGGGCTAGAGTGGAATTTGCTAAACGCCCGTGCTGTAATTCTTGGAGAGGCATGCCAAGCGGGCATGC
TGGGGGGGTGTTTAGCGCGGCTGGGTTTGTGTATTACCGCTATGGGTGGAAACCGGCTCTTCCTGTGATCGCTCTTGCAA
TCCTCACTGATGCCAGCAGAGTGGTGGCAGGAAAACACACGATCTTACAAGTTACGATCGGCAGCCTTATCGCATGGGGG
TTTGCTTATTTATTCACTTCACGCTACAAACCCAAACAATGGATGCTCTATCCTGAAATCTCTAGCGATTTTAAGGGCAG
TAGCCGCTATGGGGTGAGCTTTTCTTATCAATGGTAA

Upstream 100 bases:

>100_bases
ATGCGCTCATTATCATTAGCCTAGTCTTTATCGCATGCTATTTAATAGGCTATGCTTATTTGAACAGGCGGGTTTATGCT
TCAGAAAAGCGAGCGTTTTA

Downstream 100 bases:

>100_bases
AGGGATAAAGTGTTAAAAAAGTTATTACTCATTTTGCTTTTTTTAGGGTTTTTAAGAGCACAAAGCGAACATTATGAAAT
CATCGTTGAGCTCTCAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKLKGLFLSLLLWVYPLRSEPINEGAYILEEIGDVLRFLPIFVGTVSLAMRDYRGLGELAVGTLVTQGVIYGLKGAFST
AHKDGARVEFAKRPCCNSWRGMPSGHAGGVFSAAGFVYYRYGWKPALPVIALAILTDASRVVAGKHTILQVTIGSLIAWG
FAYLFTSRYKPKQWMLYPEISSDFKGSSRYGVSFSYQW

Sequences:

>Translated_198_residues
MKKLKGLFLSLLLWVYPLRSEPINEGAYILEEIGDVLRFLPIFVGTVSLAMRDYRGLGELAVGTLVTQGVIYGLKGAFST
AHKDGARVEFAKRPCCNSWRGMPSGHAGGVFSAAGFVYYRYGWKPALPVIALAILTDASRVVAGKHTILQVTIGSLIAWG
FAYLFTSRYKPKQWMLYPEISSDFKGSSRYGVSFSYQW
>Mature_198_residues
MKKLKGLFLSLLLWVYPLRSEPINEGAYILEEIGDVLRFLPIFVGTVSLAMRDYRGLGELAVGTLVTQGVIYGLKGAFST
AHKDGARVEFAKRPCCNSWRGMPSGHAGGVFSAAGFVYYRYGWKPALPVIALAILTDASRVVAGKHTILQVTIGSLIAWG
FAYLFTSRYKPKQWMLYPEISSDFKGSSRYGVSFSYQW

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21964; Mature: 21964

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKGLFLSLLLWVYPLRSEPINEGAYILEEIGDVLRFLPIFVGTVSLAMRDYRGLGEL
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVGTLVTQGVIYGLKGAFSTAHKDGARVEFAKRPCCNSWRGMPSGHAGGVFSAAGFVYYR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCCCCCCCCHHHHHCEEEEE
YGWKPALPVIALAILTDASRVVAGKHTILQVTIGSLIAWGFAYLFTSRYKPKQWMLYPEI
CCCCCHHHHHHHHHHHCCHHHHHCCHHHEEHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SSDFKGSSRYGVSFSYQW
CCCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKKLKGLFLSLLLWVYPLRSEPINEGAYILEEIGDVLRFLPIFVGTVSLAMRDYRGLGEL
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AVGTLVTQGVIYGLKGAFSTAHKDGARVEFAKRPCCNSWRGMPSGHAGGVFSAAGFVYYR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCCCCCCCCCCHHHHHCEEEEE
YGWKPALPVIALAILTDASRVVAGKHTILQVTIGSLIAWGFAYLFTSRYKPKQWMLYPEI
CCCCCHHHHHHHHHHHCCHHHHHCCHHHEEHHHHHHHHHHHHHHHHCCCCCCCEEEECCC
SSDFKGSSRYGVSFSYQW
CCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA