Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528347

Identifier: 188528347

GI number: 188528347

Start: 1580172

End: 1580507

Strand: Reverse

Name: 188528347

Synonym: HPSH_08105

Alternate gene names: NA

Gene position: 1580507-1580172 (Counterclockwise)

Preceding gene: 188528348

Following gene: 188528330

Centisome position: 98.26

GC content: 33.33

Gene sequence:

>336_bases
TTGTTAGAAAAAATGGTAAAAGAAAGTGAAAATAAAGCGTTTTACACAAGTTTCTGCCAACATTACGACACGCTTTTTGA
TGGAGCCTTTGAAGAAATCAATCAGAATCAAACACCTATCAGAAGAGAGCAAAAGAAACGCGTCAAATGCTGGCTACACC
CCTATATCACGCTTTCTATTTGTTTGAATAGAGGTTTTATTCCTTGTGGGATGGACGATTTGGATCCCACTGAAGCTACC
GCTAAAATAGCAGAACAAAGAAATACAGAAATTCTTAAAGAACTTTTTAATTTTGATTTAAAAAAACTTCAAGCATTGAT
TGATTTTTTAAGATAA

Upstream 100 bases:

>100_bases
ACACCGCTTAAACGATGAAGAGTTTAACCAGATTAAGATTTTTTTATTACCAGAAAATGATGAAAGCCAACACAACCACA
AATACTGCGAGCTGGAACAT

Downstream 100 bases:

>100_bases
ACCCAATAAAAACCCTTGATTTTTACAAGTATTAGAATCTTTCTCAAATTGAGTTTAAACCACTTAAAAAGCTTTGTAGC
CATAAAATCTTATAGGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MLEKMVKESENKAFYTSFCQHYDTLFDGAFEEINQNQTPIRREQKKRVKCWLHPYITLSICLNRGFIPCGMDDLDPTEAT
AKIAEQRNTEILKELFNFDLKKLQALIDFLR

Sequences:

>Translated_111_residues
MLEKMVKESENKAFYTSFCQHYDTLFDGAFEEINQNQTPIRREQKKRVKCWLHPYITLSICLNRGFIPCGMDDLDPTEAT
AKIAEQRNTEILKELFNFDLKKLQALIDFLR
>Mature_111_residues
MLEKMVKESENKAFYTSFCQHYDTLFDGAFEEINQNQTPIRREQKKRVKCWLHPYITLSICLNRGFIPCGMDDLDPTEAT
AKIAEQRNTEILKELFNFDLKKLQALIDFLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13137; Mature: 13137

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKMVKESENKAFYTSFCQHYDTLFDGAFEEINQNQTPIRREQKKRVKCWLHPYITLSI
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
CLNRGFIPCGMDDLDPTEATAKIAEQRNTEILKELFNFDLKKLQALIDFLR
HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLEKMVKESENKAFYTSFCQHYDTLFDGAFEEINQNQTPIRREQKKRVKCWLHPYITLSI
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
CLNRGFIPCGMDDLDPTEATAKIAEQRNTEILKELFNFDLKKLQALIDFLR
HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA