Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528310

Identifier: 188528310

GI number: 188528310

Start: 1542938

End: 1543096

Strand: Direct

Name: 188528310

Synonym: HPSH_07910

Alternate gene names: NA

Gene position: 1542938-1543096 (Clockwise)

Preceding gene: 188528308

Following gene: 188528312

Centisome position: 95.92

GC content: 29.56

Gene sequence:

>159_bases
TTGATTTTAAACGGCTTCAAAGCGCTTGGCCTAAATTATTGCTTTTTGGTGTTTGTGTATATTACAATTTTTAGTCTTAA
AATTCTTTATCAAAAGGATTTTATGATCGTTCTTTCTTGGCATTTCTTGTTGTTGGCTTCATTTTCCAGCTTTTTTTAA

Upstream 100 bases:

>100_bases
ACACACAAGACATTCTTTGACGCTAAAAGCGGTTTAACTTTTCATCTAAACACCGCCCCTTATAGAACAAAATCATAAAC
TGATGATTTAAGCCTAAGCC

Downstream 100 bases:

>100_bases
CTTTTTATCGTTGTGTTTGAAAAGCGATCAGCGACTCATTATAAAAGATGGCTTCTTAAATTTTACAGCTATTGATGATG
AGATCTAAGATCTCTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MILNGFKALGLNYCFLVFVYITIFSLKILYQKDFMIVLSWHFLLLASFSSFF

Sequences:

>Translated_52_residues
MILNGFKALGLNYCFLVFVYITIFSLKILYQKDFMIVLSWHFLLLASFSSFF
>Mature_52_residues
MILNGFKALGLNYCFLVFVYITIFSLKILYQKDFMIVLSWHFLLLASFSSFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6165; Mature: 6165

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNGFKALGLNYCFLVFVYITIFSLKILYQKDFMIVLSWHFLLLASFSSFF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MILNGFKALGLNYCFLVFVYITIFSLKILYQKDFMIVLSWHFLLLASFSSFF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA