Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528243

Identifier: 188528243

GI number: 188528243

Start: 1466257

End: 1466832

Strand: Reverse

Name: 188528243

Synonym: HPSH_07545

Alternate gene names: NA

Gene position: 1466832-1466257 (Counterclockwise)

Preceding gene: 188528244

Following gene: 209406225

Centisome position: 91.19

GC content: 41.67

Gene sequence:

>576_bases
ATGCGTTGTTTAACTTGTTTGAAGCTTTCTTTTAAGCCCCTTTGCCCAAATTGCTTGAACGATTTGCCCTTAAGCTTAAA
AGTAAGGGTTTTAGAGGGCGTGAGCGTGTATAGTTTTTACGCTTATAGCGAAATAGAAGAGCTCATTAAAAGCAAATACG
CGCTGATTGGCTCTCGCATTTTGCCCTTGCTTTCTCTAAAAGCCGGCGCGGAATTTGTGAAAATCCTGCAAGAAAAAGGC
TTGACTACCCCCCTTTATGGCATCGCCATTGATGATAAAATCAAATCCTTTTACTCGCATTCAGCCGCGCTTTTAAAAGG
CTTTTGTCAAGGCAATTTAAAAGCCACTTACGGGCGTTTAAGGGCTTCTAATGCTGTTTCGTATGCCGGGAAAAGCTTAG
AATTTCGCGCCAATAACCCACGGAATTTCACCTTCAAAGGCGATGAAAATTTAGATTATTTTTTATTAGATGATATTATC
ACCACCGGCACCACCCTAAAAGAAGCCCTAAAATACCTTAAAACCCTAAACATCAAAACGCACTTTGCGATCGCGCTTTG
CAGCGCGGATGAATGA

Upstream 100 bases:

>100_bases
ACGCTCATGCGTTAAAAGAACAATTCGGGTGCGAAGTTTTGGAATTAGACGCTCAAAAAAGCGTTTGGGATCTGCACCGC
CAGATCGTAGCCTTTATTGA

Downstream 100 bases:

>100_bases
GTTATAATTTTAATTTTTAAAAGGATAAAACCATGCAAGCTTTTCAGTTAGAAGATGATGTTGATGACTATGTTAAAAAA
GAATTGGCAAAATTAGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Phosphoribosyltransferase; Purine/Pyrimidine Phosphoribosyltransferase; Transformation Protein; Amidophosphoribosyltransferase

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSLKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRASNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE

Sequences:

>Translated_191_residues
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSLKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRASNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE
>Mature_191_residues
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRILPLLSLKAGAEFVKILQEKG
LTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRLRASNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDII
TTGTTLKEALKYLKTLNIKTHFAIALCSADE

Specific function: Unknown

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21268; Mature: 21268

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRI
CCCHHHHHCCCCCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPLLSLKAGAEFVKILQEKGLTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRL
HHHHHHHCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RASNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDIITTGTTLKEALKYLKTLNIKT
HHCCHHHHCCCCEEEECCCCCEEEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHHCCCCE
HFAIALCSADE
EEEEEEECCCC
>Mature Secondary Structure
MRCLTCLKLSFKPLCPNCLNDLPLSLKVRVLEGVSVYSFYAYSEIEELIKSKYALIGSRI
CCCHHHHHCCCCCCCCHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LPLLSLKAGAEFVKILQEKGLTTPLYGIAIDDKIKSFYSHSAALLKGFCQGNLKATYGRL
HHHHHHHCCHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RASNAVSYAGKSLEFRANNPRNFTFKGDENLDYFLLDDIITTGTTLKEALKYLKTLNIKT
HHCCHHHHCCCCEEEECCCCCEEEECCCCCCCEEEHHHHHHCCHHHHHHHHHHHHCCCCE
HFAIALCSADE
EEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA