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The map label for this gene is yrbE [C]

Identifier: 188528238

GI number: 188528238

Start: 1456314

End: 1457447

Strand: Reverse

Name: yrbE [C]

Synonym: HPSH_07510

Alternate gene names: 188528238

Gene position: 1457447-1456314 (Counterclockwise)

Preceding gene: 188528240

Following gene: 188528237

Centisome position: 90.61

GC content: 40.3

Gene sequence:

>1134_bases
ATGAAGACAGAGAAACAAAAATTTTTAGAAATGCGTAAAGATGGGGCGAACTCTGTGCTGATTTTAAGAGGGGATTGGGA
TTTTAAAACGAGCGTGTTTCGTTTAGATGAGTTGAAAAAAAAATTATTAGATCATCAAGGGTCTTTAAAAGTGGATTTTT
CAGGGTGCCAAAAAATAGATTTTGTTTTTGGCATGTTTTTATTTGATTTGGTTAAGGAGCGTTCTTTAAACATTGAATTG
TGCAATGTGAGCGAGAATAACGCATGCGCTTTGAAAGTGGTTAAAGACTGGCTTGAAAAAGAAGAGGATTTAGAGTCTAA
AAAAGTGGGCAAACGATACGAACTCATGATCACTAAATTGGGTAAGAGTATCGTAGAAACTTACAACACCTTTTTAAACG
CGTTCAATTTTTGCGGCATGATTTTATTTTACTTCATTAAAAGCGTTTTCAACCCCAAACGCTTTTGTATCACTCCTTTG
CTTTATCATATCAACGAATCCGGGTTTAAGGTTTTGCCCGTGAGCATTTTAACAGTGTTTATCGTGGGGTTTGCCGTTGC
TTTACAAGGGGCTTTGCAATTGCAAGACATGGGTGCGCCTTTAATGTCGGTGGAAATGACGGCTAAACTCGCTTTAAGAG
AGATTGGCCCTTTTATTTTAACCCTTGTGGTTGCTGGGAGGAGCGCGAGCAGTTTTACCGCGCAAATTGGGGTGATGAAG
ATCACTGAAGAATTAGACGCGATGAAAACCATGGGCTTTAACCCTTTTGAATTTTTAGTGTTGCCTAGGGTGTTAGCCTT
AGTGATTGTTTTGCCTTTATTGGTGTTTATTGCCGATGCGTTCGCCATTCTTGGGGGCATGTTTGCGATTAAATACCAAT
TGGATTTAGGCTTCCCGAGTTATATAGACAGATTGCATGACACGGTGGGTTGGAATCATTTTTTGGTAGGGATTGTCAAA
GCCCCTTTTTGGGGGTTTGCGATTGCGATGGTGGGGTGCATGCGCGGGTTTGAAGTCAAGGGGGATACTGAGAGCATTGG
GCGCTTGACCACCATTAGCGTCGTGAATGCGTTGTTTTGGATCATTTTCTTAGACGCTGTTTTTTCTATTATCTTTTCTA
AGTTGAATATATGA

Upstream 100 bases:

>100_bases
ATCGTTTAACTTTTTGTTTTATCATTGTGTTAAAATAGTCGCTTTAACAAACAAAATTTTGTTAATAGATTTTACCTAAT
CTAAGAGAGAATATATTTTA

Downstream 100 bases:

>100_bases
TGAGCGCTGCTGACAATCAAGTCTTAATTGAAGTGAAGGATCTCCATAGCGCTTTTGGGAGCACCATTATCCATAGGGGC
GTGAGTTTTAGCGTGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKKLLDHQGSLKVDFSGCQKIDFVFGMFLFDLVKERSLNIEL
CNVSENNACALKVVKDWLEKEEDLESKKVGKRYELMITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL
LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVK
APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI

Sequences:

>Translated_377_residues
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKKLLDHQGSLKVDFSGCQKIDFVFGMFLFDLVKERSLNIEL
CNVSENNACALKVVKDWLEKEEDLESKKVGKRYELMITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL
LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVK
APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI
>Mature_377_residues
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKKLLDHQGSLKVDFSGCQKIDFVFGMFLFDLVKERSLNIEL
CNVSENNACALKVVKDWLEKEEDLESKKVGKRYELMITKLGKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPL
LYHINESGFKVLPVSILTVFIVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPSYIDRLHDTVGWNHFLVGIVK
APFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFWIIFLDAVFSIIFSKLNI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=258, Percent_Identity=31.0077519379845, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 42456; Mature: 42456

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKKLLDHQGSLKVDFSGCQKID
CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
FVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKRYELMITKL
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHH
GKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPLLYHINESGFKVLPVSILTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHH
IVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH
YIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFW
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IIFLDAVFSIIFSKLNI
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTEKQKFLEMRKDGANSVLILRGDWDFKTSVFRLDELKKKLLDHQGSLKVDFSGCQKID
CCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHH
FVFGMFLFDLVKERSLNIELCNVSENNACALKVVKDWLEKEEDLESKKVGKRYELMITKL
HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHH
GKSIVETYNTFLNAFNFCGMILFYFIKSVFNPKRFCITPLLYHINESGFKVLPVSILTVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHH
IVGFAVALQGALQLQDMGAPLMSVEMTAKLALREIGPFILTLVVAGRSASSFTAQIGVMK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ITEELDAMKTMGFNPFEFLVLPRVLALVIVLPLLVFIADAFAILGGMFAIKYQLDLGFPS
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHH
YIDRLHDTVGWNHFLVGIVKAPFWGFAIAMVGCMRGFEVKGDTESIGRLTTISVVNALFW
HHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
IIFLDAVFSIIFSKLNI
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA