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The map label for this gene is 188528236

Identifier: 188528236

GI number: 188528236

Start: 1454729

End: 1455544

Strand: Reverse

Name: 188528236

Synonym: HPSH_07500

Alternate gene names: NA

Gene position: 1455544-1454729 (Counterclockwise)

Preceding gene: 188528237

Following gene: 188528235

Centisome position: 90.49

GC content: 39.34

Gene sequence:

>816_bases
TTGGAAAGGCATGTGAATTACACTTTAATCGGCGGGCTCTTCTTTTTATGCTTAGTGTGCATGGTAGGCTTTATTTTATG
GCTAGGCCATTTGGGATTAGAGGACGGAAAGTATTATGAATATGTGGTTTATACGGACAAAGACTTGGGAGGCATTGCGA
CCAACTCGCCCGTTAATTACAAAGGGATTCAAGTGGGCAATGTCATCAAGGTGGGTTTTGCAAAGGATAAAGTGGGGGTG
GTCCGTTTGGATTTGATGATTAAATCCAGCGTTAAGATCCGTAAAGACTCCAAAGTAGCGGTTTCTTCTAGGGGGTTTAT
GGGGTTAAAATTTTTAGCCTTAGAGCAAAGCCACAATGAAGAATTTTATGGCAGTGGCGATAAAGGGGAGCGGATTTTGA
TCTTTAAAGAAGGGTTTATGGATCGCTTGAGCGTGGATGCTAATCAAGTGATGCAAGAAGTGATGAAAGCGATTAAAAAT
GTGAATAAGATTTTAGATGATGAAAATGTGGAAAAATTCAAGCACATTCTTGTTTCAGTAGATGATCTTATCGCTAATTT
GGATTCAAGGAAAGTGCAATTTGACGCTTTAATCAAAAACGCTAACAACCTCGTTTCTAGCGCCAATAATGTGGCTTTAG
ATGTGGATAAGCGCTTAAAAGAAGGGCAATACGACTTTAAAGCGATGTTCACTCCCTTAATCATGCAAGCGCAGTTGAGC
TTGAGAAACATTGATAATTTTGTGGAAAAAGGCTCTGCTTTGATAGACAAATTTGACGCTAACCCCTATAAAACGATTTT
TGGAGAAAGGAAATAA

Upstream 100 bases:

>100_bases
TATTAGAGTTTAATGGGGATTTAAAAGATTTTATCAAAAAAGCTCAAACTCAAGGGCTAGATGAAGGCAATTTATTCAAT
TCAACACGAGGAGAGAAATT

Downstream 100 bases:

>100_bases
TCATGAGAGCTACGGCGATAAAAATCTTTTCACTCTCATCAGCATTAGCCCTATTGCTTCAGGGTTGCTTGAGCATCAAT
TTAAAACAAATGCTACCAGA

Product: ABC transport system substrate binding protein

Products: NA

Alternate protein names: Mammalian Cell Entry Related Domain-Containing Protein; ABC Transporter Permease; Mce Related Protein; ABC-Type Transport System Periplasmic Component; Virulence Factor Mce-Like Protein

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV
VRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNEEFYGSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKN
VNKILDDENVEKFKHILVSVDDLIANLDSRKVQFDALIKNANNLVSSANNVALDVDKRLKEGQYDFKAMFTPLIMQAQLS
LRNIDNFVEKGSALIDKFDANPYKTIFGERK

Sequences:

>Translated_271_residues
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV
VRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNEEFYGSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKN
VNKILDDENVEKFKHILVSVDDLIANLDSRKVQFDALIKNANNLVSSANNVALDVDKRLKEGQYDFKAMFTPLIMQAQLS
LRNIDNFVEKGSALIDKFDANPYKTIFGERK
>Mature_271_residues
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV
VRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNEEFYGSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKN
VNKILDDENVEKFKHILVSVDDLIANLDSRKVQFDALIKNANNLVSSANNVALDVDKRLKEGQYDFKAMFTPLIMQAQLS
LRNIDNFVEKGSALIDKFDANPYKTIFGERK

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30539; Mature: 30539

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPVNY
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE
CCEEECCEEEEECCCCCCCEEEEEEEEECCEEEECCCEEEEECCCCCCEEEEEEECCCCC
EFYGSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKNVNKILDDENVEKFKHILVSV
CCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DDLIANLDSRKVQFDALIKNANNLVSSANNVALDVDKRLKEGQYDFKAMFTPLIMQAQLS
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHH
LRNIDNFVEKGSALIDKFDANPYKTIFGERK
HHHHHHHHHCCHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPVNY
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE
CCEEECCEEEEECCCCCCCEEEEEEEEECCEEEECCCEEEEECCCCCCEEEEEEECCCCC
EFYGSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKNVNKILDDENVEKFKHILVSV
CCCCCCCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
DDLIANLDSRKVQFDALIKNANNLVSSANNVALDVDKRLKEGQYDFKAMFTPLIMQAQLS
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHH
LRNIDNFVEKGSALIDKFDANPYKTIFGERK
HHHHHHHHHCCHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA