| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is tolQ [C]
Identifier: 188528215
GI number: 188528215
Start: 1435888
End: 1436340
Strand: Direct
Name: tolQ [C]
Synonym: HPSH_07395
Alternate gene names: 188528215
Gene position: 1435888-1436340 (Clockwise)
Preceding gene: 188528214
Following gene: 188528216
Centisome position: 89.27
GC content: 41.5
Gene sequence:
>453_bases ATGAAAGAAATGGTAGATTATGGGGTTATAGGGTTTTTGATCTTTTTATCAGTCATCGTTATAGCGATCGCAATAGAAAG GTTGTGGTTTTTTGCCACTCTTCGTGTAGATGACTACACAGACAGGCGTAAATTAGAACTGGCCTTACACAAACGACTGA CTTTAGTGGCCACGATTGGCTCTAACGCCCCTTATATCGGTCTTTTAGGAACGGTTATGGGGATCATGCTCACTTTTATG GATTTAGGAGCCGCTTCTGGCATTGACACTAAAGCGATCATGACTAATTTAGCCCTTGCTTTGAAAGCGACTGGCATGGG GTTATTGGTAGCGATCCCTGCGATTGTGATTTATAACTTTTTAGTGAGAAAAAGCGAGATTTTAGTCACTAAATGGGATA TTTTCCACCACCCGGTTGACACGCAATCCCATGAAATTCATAACAAAGCCTAA
Upstream 100 bases:
>100_bases TGAAAGGAAAAAAATTGCACGATAAAAGACAAAGTCTTAAGGAAAAAGCGCTCAATAAAGAAATTCTTGCTGATTTAAAA CACCACTTTAAAGGATAATA
Downstream 100 bases:
>100_bases GGATTAAGCGGTGAAAAAAGTAGAATCCATGAATGTGGTGCCTTTCATTGACATCATGCTTGTGTTGTTGGTGATCGTGC TTACGACAGCGTCTTTTGTG
Product: biopolymer transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKEMVDYGVIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFM DLGAASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNFLVRKSEILVTKWDIFHHPVDTQSHEIHNKA
Sequences:
>Translated_150_residues MKEMVDYGVIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFM DLGAASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNFLVRKSEILVTKWDIFHHPVDTQSHEIHNKA >Mature_150_residues MKEMVDYGVIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIGSNAPYIGLLGTVMGIMLTFM DLGAASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNFLVRKSEILVTKWDIFHHPVDTQSHEIHNKA
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=93, Percent_Identity=41.9354838709677, Blast_Score=67, Evalue=4e-13, Organism=Escherichia coli, GI1789381, Length=69, Percent_Identity=43.4782608695652, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014172 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 16643; Mature: 16643
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEMVDYGVIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHEEEEEEEC SNAPYIGLLGTVMGIMLTFMDLGAASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVRKSEILVTKWDIFHHPVDTQSHEIHNKA HHCCCCEEEEEHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKEMVDYGVIGFLIFLSVIVIAIAIERLWFFATLRVDDYTDRRKLELALHKRLTLVATIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHEEEEEEEC SNAPYIGLLGTVMGIMLTFMDLGAASGIDTKAIMTNLALALKATGMGLLVAIPAIVIYNF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LVRKSEILVTKWDIFHHPVDTQSHEIHNKA HHCCCCEEEEEHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]