| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188528190
Identifier: 188528190
GI number: 188528190
Start: 1417498
End: 1417752
Strand: Reverse
Name: 188528190
Synonym: HPSH_07270
Alternate gene names: NA
Gene position: 1417752-1417498 (Counterclockwise)
Preceding gene: 188528191
Following gene: 188528188
Centisome position: 88.14
GC content: 47.06
Gene sequence:
>255_bases ATGAAGAACAACACGGTGAACACCACCATCACCATCACACACACCACCACCACTATCATGGCGGTGAACACCACCATCAC CACCACAGCTCTCATCATGAAGAAGGTTGTTGCAGCACTAGCGACAGTCATCATCAAGAAGAAGGTTGTTGCCACGGGCA TCACGAGTAATATCGGTGTGGCTAGGGGCAACTTGACTAGGGTTGTCTCTGGCTTTGACTTTAAAATACCATCATTCAAA TCTAACCCATTCTAA
Upstream 100 bases:
>100_bases CCTTCCATTAACAATTGGTTAGATTTTATATTGTAGAATAAAATCCTAGCCAGTGAGCTAGAATTTAAATTTTTAATCAA AGGAGTCATCATGGCACACC
Downstream 100 bases:
>100_bases TCAAACCCGTTAAATCCAATCAAACCACTGCTTTATAGCATTCAAAATATTAAAACCATTTTTCAATCAAAGAACATGCA AGTTGCCCCCCATTTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKNNTVNTTITITHTTTTIMAVNTTITTTALIMKKVVAALATVIIKKKVVATGITSNIGVARGNLTRVVSGFDFKIPSFK SNPF
Sequences:
>Translated_84_residues MKNNTVNTTITITHTTTTIMAVNTTITTTALIMKKVVAALATVIIKKKVVATGITSNIGVARGNLTRVVSGFDFKIPSFK SNPF >Mature_84_residues MKNNTVNTTITITHTTTTIMAVNTTITTTALIMKKVVAALATVIIKKKVVATGITSNIGVARGNLTRVVSGFDFKIPSFK SNPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8940; Mature: 8940
Theoretical pI: Translated: 12.00; Mature: 12.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNNTVNTTITITHTTTTIMAVNTTITTTALIMKKVVAALATVIIKKKVVATGITSNIGV CCCCCEEEEEEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ARGNLTRVVSGFDFKIPSFKSNPF CCCCCEEEECCCCEECCCCCCCCC >Mature Secondary Structure MKNNTVNTTITITHTTTTIMAVNTTITTTALIMKKVVAALATVIIKKKVVATGITSNIGV CCCCCEEEEEEEEECEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ARGNLTRVVSGFDFKIPSFKSNPF CCCCCEEEECCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA