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The map label for this gene is ygaZ [C]

Identifier: 188528119

GI number: 188528119

Start: 1338435

End: 1339121

Strand: Reverse

Name: ygaZ [C]

Synonym: HPSH_06880

Alternate gene names: 188528119

Gene position: 1339121-1338435 (Counterclockwise)

Preceding gene: 188528120

Following gene: 188528118

Centisome position: 83.25

GC content: 39.74

Gene sequence:

>687_bases
ATGCATGATTTTCTAAAAGCCTTTAAAGACGCTTTCCCTCATACCATTTCTATCTTTTTAGGGTATTTGCTTATGGGAAT
GACTTTTGGGGTGCTTTTAGACCAGCATGGCTATGATTATAAAGTGGCCTTGTTCATGTCGTTATTCATCTACGCTGGGG
CGGTGCAATTTGTAGCGATCACGCTTTTAAGCGTGCAAGCGAGCTTGATGAATGTCGTTATTGTGAGCTTGTTGGTGAAT
GCGAGACAAACTTGTTATGCGCTTTCTATGCTAGACAGATTTAAAAACACCCAATGGCGTTTGCCCTATTTAGCGCATGC
GCTCACGGATGAAACTTTTGCTCTATTGAATTTATACGCTCCTAAAGAGGGGGTTAGTGAAAAAGACTTTATTTTTAGCA
TTTCCTTACTCAACCACTCTTATTGGATTTTTGGCTCGTTGGTGGGTTCGTTGGTGGGAACGCATTTTTCTTTTGACACT
CAAGGCATGGAATTTGTGATGACAGCGATTTTTATCGTGCTGTTTATGGAGCAATACAAACGAAACACAAACCACAAAAA
CGCATGGCTTGGGATTTTTATTGCGGTTGTTTGTTTAGCGCTCTTTGGGACTGAATACTTTTTGCTCATCGCTTTAGTTT
TAATGGTGCTTGCTCTTATTTTGTTTAAAAAGCAGTTAGAATGTTAA

Upstream 100 bases:

>100_bases
AAGTTGCATGCGAGTTTTGGCTATGAGAGCGAGCCGCATAAAAGCGTTTTAGAAACTTGTATTTCTAAAATTAAAGACTG
GTTTAAATGAAAGGTTGTTG

Downstream 100 bases:

>100_bases
TGCATTCTATACTCATTATTTTAGTCATCATATTAACGACTTATTTCACACGCATCTGGCCTTTTATGGTGTTTAACGCT
AAAAACCCGCCCAACGACTT

Product: branched-chain amino acid transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MHDFLKAFKDAFPHTISIFLGYLLMGMTFGVLLDQHGYDYKVALFMSLFIYAGAVQFVAITLLSVQASLMNVVIVSLLVN
ARQTCYALSMLDRFKNTQWRLPYLAHALTDETFALLNLYAPKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGTHFSFDT
QGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFKKQLEC

Sequences:

>Translated_228_residues
MHDFLKAFKDAFPHTISIFLGYLLMGMTFGVLLDQHGYDYKVALFMSLFIYAGAVQFVAITLLSVQASLMNVVIVSLLVN
ARQTCYALSMLDRFKNTQWRLPYLAHALTDETFALLNLYAPKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGTHFSFDT
QGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFKKQLEC
>Mature_228_residues
MHDFLKAFKDAFPHTISIFLGYLLMGMTFGVLLDQHGYDYKVALFMSLFIYAGAVQFVAITLLSVQASLMNVVIVSLLVN
ARQTCYALSMLDRFKNTQWRLPYLAHALTDETFALLNLYAPKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGTHFSFDT
QGMEFVMTAIFIVLFMEQYKRNTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFKKQLEC

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=193, Percent_Identity=24.8704663212435, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25924; Mature: 25924

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDFLKAFKDAFPHTISIFLGYLLMGMTFGVLLDQHGYDYKVALFMSLFIYAGAVQFVAI
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TLLSVQASLMNVVIVSLLVNARQTCYALSMLDRFKNTQWRLPYLAHALTDETFALLNLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGTHFSFDTQGMEFVMTAIFIVLFMEQYK
CCCCCCCCHHHEEHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RNTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFKKQLEC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHDFLKAFKDAFPHTISIFLGYLLMGMTFGVLLDQHGYDYKVALFMSLFIYAGAVQFVAI
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
TLLSVQASLMNVVIVSLLVNARQTCYALSMLDRFKNTQWRLPYLAHALTDETFALLNLYA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
PKEGVSEKDFIFSISLLNHSYWIFGSLVGSLVGTHFSFDTQGMEFVMTAIFIVLFMEQYK
CCCCCCCCHHHEEHHHHHCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RNTNHKNAWLGIFIAVVCLALFGTEYFLLIALVLMVLALILFKKQLEC
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]