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The map label for this gene is 188528054

Identifier: 188528054

GI number: 188528054

Start: 1286531

End: 1287523

Strand: Direct

Name: 188528054

Synonym: HPSH_06555

Alternate gene names: NA

Gene position: 1286531-1287523 (Clockwise)

Preceding gene: 188528053

Following gene: 188528055

Centisome position: 79.98

GC content: 36.96

Gene sequence:

>993_bases
TTGATTTTGAGCGGCTTTAACCCCTTAAATTCTCCCTTAATCGCAAGCTCTTCTCTTAGCTTGAAAGAAGCCTATTGTTT
AGAAAAATTATCTCTTAAGAAAGGGTTTAAAATCAATTACAAGATGACAAAAGATAGCTTAAGCCTTTTAGAAAAAAGCG
ATTTGTGCGTTTTGTTTGGGGGTTTTTCAAACGCTTGTTTGAATGAAAATGAACGATTGATTCTAGAAAGCATTAACCAA
CTAAAACTCCCCTACGCCTTGTTAAGACCCTTACAAGACACAAGAGATTTGCAAGAAAATTGTCTTTTTGCGTCGTATGA
AATCAACACGGAAGCGGCGGTTTTGGCTTTGATTTTAAGGGGTATTTTAGAAAAAACTTCCCAATTAAAAGGGCATGTTT
TAGAAGATGTTGATGTGGGGTATTTAAGCTCTGAAGCGAACATGAGTGAAGAAGAATTGCAAGAACTTATCGCTCTTATC
ATTAAAGCGAAAAAAAAGGTGCTTGTTTTAAACAGAGAAATCACTAAGCATGCGGATAGCGCCTTTTTATACACCCTTTT
AAGCGAGTTGCAAAACCACCTAGAAATTTTGCATATCCCTTGCAATAATTCAAACGCAACCCCCACTTTTTATGATTCTA
AAGATCAAGAATGGCTGCTAGAAACAGCCTTAAAAGAGGGCATTTTGCCTTTTGAATCGCAACTTAAATCAAAAGATTTA
GAGCTTTTAGAGCGAATGGGTGAGGCTAACGGCTCGTTTGTTTATGTTTCTTACAAGAGTCTTGAAACCCCCAGATTATC
TTTTTCCAAGCAATTTAAGATCGCTAATAAAATCCAGCATTCTAAAGCGGGGTTTCAAATCTCAAATAAAACGCTAGAAT
GCGAGTTAGAAGAAAGCCCCCATTTGAAGGGTTTGATTGCGATTTTAGAAGGGGCGTTTTTTGACGCTTACCCTTATATC
CCTATTTTATCCCACTCTCAAGGAATTTCATGA

Upstream 100 bases:

>100_bases
TCCCTAAGAGTGCTGAATTTATCCAATCTAAAGGGCATGAGCTCCTCAATTCTTTGCGTTTCAATCAAGCGGATTGGACG
ATTGTCGTGAGGAAAAAGGC

Downstream 100 bases:

>100_bases
TCACAATAAATATCAATGGCAAAATGATTGAATGCCAAGAGGGACAAAGCGTTTTAGAGGCTGCCAGGAGCGCTGGGATC
TACATCCCTACTATTTGCTA

Product: NADH-ubiquinone oxidoreductase chain F

Products: NAD+; ubiquinol

Alternate protein names: NADH Dehydrogenase I Subunit F

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MILSGFNPLNSPLIASSSLSLKEAYCLEKLSLKKGFKINYKMTKDSLSLLEKSDLCVLFGGFSNACLNENERLILESINQ
LKLPYALLRPLQDTRDLQENCLFASYEINTEAAVLALILRGILEKTSQLKGHVLEDVDVGYLSSEANMSEEELQELIALI
IKAKKKVLVLNREITKHADSAFLYTLLSELQNHLEILHIPCNNSNATPTFYDSKDQEWLLETALKEGILPFESQLKSKDL
ELLERMGEANGSFVYVSYKSLETPRLSFSKQFKIANKIQHSKAGFQISNKTLECELEESPHLKGLIAILEGAFFDAYPYI
PILSHSQGIS

Sequences:

>Translated_330_residues
MILSGFNPLNSPLIASSSLSLKEAYCLEKLSLKKGFKINYKMTKDSLSLLEKSDLCVLFGGFSNACLNENERLILESINQ
LKLPYALLRPLQDTRDLQENCLFASYEINTEAAVLALILRGILEKTSQLKGHVLEDVDVGYLSSEANMSEEELQELIALI
IKAKKKVLVLNREITKHADSAFLYTLLSELQNHLEILHIPCNNSNATPTFYDSKDQEWLLETALKEGILPFESQLKSKDL
ELLERMGEANGSFVYVSYKSLETPRLSFSKQFKIANKIQHSKAGFQISNKTLECELEESPHLKGLIAILEGAFFDAYPYI
PILSHSQGIS
>Mature_330_residues
MILSGFNPLNSPLIASSSLSLKEAYCLEKLSLKKGFKINYKMTKDSLSLLEKSDLCVLFGGFSNACLNENERLILESINQ
LKLPYALLRPLQDTRDLQENCLFASYEINTEAAVLALILRGILEKTSQLKGHVLEDVDVGYLSSEANMSEEELQELIALI
IKAKKKVLVLNREITKHADSAFLYTLLSELQNHLEILHIPCNNSNATPTFYDSKDQEWLLETALKEGILPFESQLKSKDL
ELLERMGEANGSFVYVSYKSLETPRLSFSKQFKIANKIQHSKAGFQISNKTLECELEESPHLKGLIAILEGAFFDAYPYI
PILSHSQGIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.5.3

Molecular weight: Translated: 37084; Mature: 37084

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSGFNPLNSPLIASSSLSLKEAYCLEKLSLKKGFKINYKMTKDSLSLLEKSDLCVLFG
CEECCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEEC
GFSNACLNENERLILESINQLKLPYALLRPLQDTRDLQENCLFASYEINTEAAVLALILR
CCCCHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCEEEEEECCCHHHHHHHHHH
GILEKTSQLKGHVLEDVDVGYLSSEANMSEEELQELIALIIKAKKKVLVLNREITKHADS
HHHHHHHHHCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
AFLYTLLSELQNHLEILHIPCNNSNATPTFYDSKDQEWLLETALKEGILPFESQLKSKDL
HHHHHHHHHHHHCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHH
ELLERMGEANGSFVYVSYKSLETPRLSFSKQFKIANKIQHSKAGFQISNKTLECELEESP
HHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCC
HLKGLIAILEGAFFDAYPYIPILSHSQGIS
CHHHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MILSGFNPLNSPLIASSSLSLKEAYCLEKLSLKKGFKINYKMTKDSLSLLEKSDLCVLFG
CEECCCCCCCCCCEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCCCEEEEEC
GFSNACLNENERLILESINQLKLPYALLRPLQDTRDLQENCLFASYEINTEAAVLALILR
CCCCHHCCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHCEEEEEECCCHHHHHHHHHH
GILEKTSQLKGHVLEDVDVGYLSSEANMSEEELQELIALIIKAKKKVLVLNREITKHADS
HHHHHHHHHCCCHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH
AFLYTLLSELQNHLEILHIPCNNSNATPTFYDSKDQEWLLETALKEGILPFESQLKSKDL
HHHHHHHHHHHHCCEEEEEECCCCCCCCCEECCCCHHHHHHHHHHHCCCCHHHHHHHHHH
ELLERMGEANGSFVYVSYKSLETPRLSFSKQFKIANKIQHSKAGFQISNKTLECELEESP
HHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCC
HLKGLIAILEGAFFDAYPYIPILSHSQGIS
CHHHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA