Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is secG

Identifier: 188528044

GI number: 188528044

Start: 1280392

End: 1280991

Strand: Direct

Name: secG

Synonym: HPSH_06505

Alternate gene names: 188528044

Gene position: 1280392-1280991 (Clockwise)

Preceding gene: 188528030

Following gene: 188528045

Centisome position: 79.6

GC content: 42.67

Gene sequence:

>600_bases
ATGACAAGCGCTCTGTTAGGCTTACAAATTGTTTTAGCGGTATTGATTGTGGTGGTGGTTTTGTTGCAAAAAAGTTCTAG
CATCGGCTTAGGGGCTTATAGTGGGAGTAATGAGTCTTTGTTTGGCGCTAAAGGGCCTGCGAGTTTTATGGCGAAATTGA
CCATGTTTTTAGGGCTGTTATTTGTTGCCAACACCATCGCTTTGGGCTATTTTTACAACAAAGAATACGGCAAAAGCATT
TTAGATGAAACTAAAACCAACAAAGAGCTTTCGCCCTTAGTCCCCGCCACCGGCACGCTTAACCCAACGCTTAATCCCAC
ACTTAACCCGACGCTCAACCCTTTAGAGCAAGCCCTCACTAACCCTTTAATGCCCAAACAAACGCCTAACGAACTTCCTA
AAGAGCCAGCCAAAACGCCTTTTATTGAAAGCCCCAAACAGAATGAAAAAAATGATGCCAATAAAGAGAATAAAGAGAAC
AATATAAAGGGCGTTGAAAAAACCAAAGAGAATACAAAAACGCCCCCAACCGCCCACCAAAAGCCTAAAACGCACACGCA
AACCAACGCCCATACAAACCAAAAAAAGGATGAAAAATAA

Upstream 100 bases:

>100_bases
CCACGCTTGAAATTAAAACTAAATTTTAGTGTATTCTTAGCAAATTTTAGATAAGATCAAGCGTAATTTTTTCTAAATTT
TAGGCAAGGAATCAGTGTTT

Downstream 100 bases:

>100_bases
TGTTACAAGCCATTTATAACGAAACCAAAGATCTAATGCAAAAAAGCATTCAGGCTTTAAATAGGGATTTTTCCACTCTA
AGGAGCGCGAAAGTTTCAGT

Product: preprotein translocase subunit SecG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVANTIALGYFYNKEYGKSI
LDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALTNPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKEN
NIKGVEKTKENTKTPPTAHQKPKTHTQTNAHTNQKKDEK

Sequences:

>Translated_199_residues
MTSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVANTIALGYFYNKEYGKSI
LDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALTNPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKEN
NIKGVEKTKENTKTPPTAHQKPKTHTQTNAHTNQKKDEK
>Mature_198_residues
TSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLLFVANTIALGYFYNKEYGKSIL
DETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALTNPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKENN
IKGVEKTKENTKTPPTAHQKPKTHTQTNAHTNQKKDEK

Specific function: Involved in protein export. Participates in an early event of protein translocation [H]

COG id: COG1314

COG function: function code U; Preprotein translocase subunit SecG

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004692 [H]

Pfam domain/function: PF03840 SecG [H]

EC number: NA

Molecular weight: Translated: 21652; Mature: 21521

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLL
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
FVANTIALGYFYNKEYGKSILDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALT
HHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
NPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKENNIKGVEKTKENTKTPPTAHQ
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
KPKTHTQTNAHTNQKKDEK
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSALLGLQIVLAVLIVVVVLLQKSSSIGLGAYSGSNESLFGAKGPASFMAKLTMFLGLL
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
FVANTIALGYFYNKEYGKSILDETKTNKELSPLVPATGTLNPTLNPTLNPTLNPLEQALT
HHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
NPLMPKQTPNELPKEPAKTPFIESPKQNEKNDANKENKENNIKGVEKTKENTKTPPTAHQ
CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
KPKTHTQTNAHTNQKKDEK
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]