Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188528002

Identifier: 188528002

GI number: 188528002

Start: 1240437

End: 1241141

Strand: Reverse

Name: 188528002

Synonym: HPSH_06285

Alternate gene names: NA

Gene position: 1241141-1240437 (Counterclockwise)

Preceding gene: 188528003

Following gene: 188528001

Centisome position: 77.16

GC content: 38.16

Gene sequence:

>705_bases
TTGAATACTGACTTTAGCCATATCACCGATATAGAGGGCATGCGTTTTATCAATGAAGAAGACGCTTTGAACAAATTGAT
TAATGAGATCCACACGCGCCACATTGATTTAAAAGATTCCATCATGCTCGCTTTGAGTTTTAACGCTCTGTATTTAGCTA
ACGCTTTAGCGCAAAAATTTGGAGCGACTTATGATATACTTTTTTTAGAACCTATCCTAGCCCCTTTAAACTCAAAATGC
GAGATCGCTTTGGTGAGTGAGAGCATGGATATAGTGATGAATGAAAGTTTGATCAATTCCTTTGACATCACTTTAGACTA
TGTTTATGGAGAAGCCAAGCGAGCTTATGAAGAAGACATTTTGTCCTACATCTATCAGTATCGCAAAGGCAATGCGATCA
AAAGCTTAAAAGATAAAAATATTTTTATCGTAGATAGGGGGATTGAAACCGGGTTTAGAGCAGGATTGGGCGTGCAAACT
TGCTTGAAAAAAGAATGCCAAGACATTTATATTTTAACCCCCATTGTCGCGCAAAATGTCGCTCAAGGCTTAGAAAGTTT
ATGCGATGGGGTGATTAGCGTGTATCGCCCTGAATGTTTTGTCTCTGTGGAGCATCATTATAAAGAACTCAAGCGATTAA
GCAATGAAGAAATTGAAAAATACTTGGGCGCCAACAACGCGCCTAATTTAAAAAAGGAACATTAA

Upstream 100 bases:

>100_bases
TTGAAAATAACTATGTTAAGCTAGAATTAGACTTTTCACCGATCACTAAAACCAATGTAACTTACCGCTCTTTACAGCGT
AAGTAAAAAAAGGAATGCAT

Downstream 100 bases:

>100_bases
ATATGGATTTTATCACCATCACTTCTAGTAACAAAACCGAAGAGTTCGCTCTCAAACAAGTGGCCAAACAAGCCACCAGC
TCTCTTATGTATCGCTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Na+/H+ Antiporter; Phosphoribosyl Transferase Domain Protein; Phosphoglycerate Dehydrogenase

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLANALAQKFGATYDILFLEPILAPLNSKC
EIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSYIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQT
CLKKECQDIYILTPIVAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH

Sequences:

>Translated_234_residues
MNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLANALAQKFGATYDILFLEPILAPLNSKC
EIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSYIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQT
CLKKECQDIYILTPIVAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
>Mature_234_residues
MNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLANALAQKFGATYDILFLEPILAPLNSKC
EIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDILSYIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQT
CLKKECQDIYILTPIVAQNVAQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26611; Mature: 26611

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLANALAQKF
CCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHH
GATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDI
CCCEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHH
LSYIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPIVAQNV
HHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHCCCEEEEHHHHHHHH
AQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
HHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNTDFSHITDIEGMRFINEEDALNKLINEIHTRHIDLKDSIMLALSFNALYLANALAQKF
CCCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHEEEEEEHHHHHHHHHHHHHH
GATYDILFLEPILAPLNSKCEIALVSESMDIVMNESLINSFDITLDYVYGEAKRAYEEDI
CCCEEHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHH
LSYIYQYRKGNAIKSLKDKNIFIVDRGIETGFRAGLGVQTCLKKECQDIYILTPIVAQNV
HHHHHHHHCCCHHHHHCCCCEEEEECCCCHHHHCCCCHHHHHHHHCCCEEEEHHHHHHHH
AQGLESLCDGVISVYRPECFVSVEHHYKELKRLSNEEIEKYLGANNAPNLKKEH
HHHHHHHHHHHHHHHCCHHEEEHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA