Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527952

Identifier: 188527952

GI number: 188527952

Start: 1186222

End: 1186341

Strand: Reverse

Name: 188527952

Synonym: HPSH_06035

Alternate gene names: NA

Gene position: 1186341-1186222 (Counterclockwise)

Preceding gene: 188527953

Following gene: 188527950

Centisome position: 73.75

GC content: 29.17

Gene sequence:

>120_bases
TTGGCTCTTAAAAAAGCTATCGCTTGCTTTTTTAAAAGCTCAATTTTAAAGATGATGGGTATTTTGCTTAATGGGTATGA
TTTAAAAAAGGGCTTTGGCTTGAAAAGAAATTATATATAG

Upstream 100 bases:

>100_bases
GCCAATAAAAAGGGGTTTTAACCCCCTTTAAATCCATGGAAAAAAGTTTGATTTTGTTTGTGAAGTGTGCAAACGCTAAA
GGTGTTTGGGGTTTCTGTTC

Downstream 100 bases:

>100_bases
GTTAGAGAAACAGCGTCAAAATGACGCCTGCTATATTTTATGATCATAGCGTCAAAATGACGCTACTAGGGCCGTGTATA
ACGCGCTCCTGTCAGAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 39; Mature: 38

Protein sequence:

>39_residues
MALKKAIACFFKSSILKMMGILLNGYDLKKGFGLKRNYI

Sequences:

>Translated_39_residues
MALKKAIACFFKSSILKMMGILLNGYDLKKGFGLKRNYI
>Mature_38_residues
ALKKAIACFFKSSILKMMGILLNGYDLKKGFGLKRNYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4427; Mature: 4295

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
7.7 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKKAIACFFKSSILKMMGILLNGYDLKKGFGLKRNYI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALKKAIACFFKSSILKMMGILLNGYDLKKGFGLKRNYI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA