| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527950
Identifier: 188527950
GI number: 188527950
Start: 1184434
End: 1184520
Strand: Reverse
Name: 188527950
Synonym: HPSH_06025
Alternate gene names: NA
Gene position: 1184520-1184434 (Counterclockwise)
Preceding gene: 188527952
Following gene: 188527946
Centisome position: 73.64
GC content: 33.33
Gene sequence:
>87_bases ATGGATCGCTTGAGAACGGGGATTAAGCTTTGCTTTATTGTTTTTTTAGGTTTTATCTTGTTATCAAACAAAGCCTATTG GTTGTAA
Upstream 100 bases:
>100_bases AAAAGCTAAAAACGATTAATTTGTGGAAAATTTACTCTCTTTAAATTCAAATGGCTAACATATGGCGCTAAAATCCGTTA TGATTAACGGATTATTTTGA
Downstream 100 bases:
>100_bases TTCTTATACAATTCTATCAAGCGCTTAGTGGAGCTGTCAAAATAAGCGTTGCTTTTATGCCCTTCTAATTCTTGTAAAAT CGGCACGGCCAGTTCTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 28; Mature: 28
Protein sequence:
>28_residues MDRLRTGIKLCFIVFLGFILLSNKAYWL
Sequences:
>Translated_28_residues MDRLRTGIKLCFIVFLGFILLSNKAYWL >Mature_28_residues MDRLRTGIKLCFIVFLGFILLSNKAYWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3332; Mature: 3332
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLRTGIKLCFIVFLGFILLSNKAYWL CCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDRLRTGIKLCFIVFLGFILLSNKAYWL CCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA