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The map label for this gene is 188527934

Identifier: 188527934

GI number: 188527934

Start: 1165044

End: 1165391

Strand: Reverse

Name: 188527934

Synonym: HPSH_05935

Alternate gene names: NA

Gene position: 1165391-1165044 (Counterclockwise)

Preceding gene: 188527935

Following gene: 188527933

Centisome position: 72.45

GC content: 39.66

Gene sequence:

>348_bases
ATGTGTGAATTAGATCCTTTGAACACGCCTTTTTCTCAAGCTGAGTGTAAGGACTATTCGTATTGCGTGGCAACTTTTTT
GGAAAAATATTTAAAAAAGGTTGTTTCTTTTCCTCAAGCTTTGAGCGTGGAGCACACGCTTTTAGAAGATAAAGTCAAAC
AAATCACTATTTATACCCACCCATCAGACATGGGGCATGTGATCGGTAAAGAGGGCAAAATGGTGAGCGCGATTAAGGCG
TTTGTTTCTGGCGTGAAAGCCAAAGATGGGTTTTCTTGTAAAATCGTTGTTTTTGCTAGTAAAAATGGCGATAAAAATCC
CCATGTTTTAGGCGATCAAACGCCTTGA

Upstream 100 bases:

>100_bases
ATTGATAAGGAGCGCTTGAATTACTGGAAAGGCGTGGGGGCTAAAATGAGCGAGAGGGTGGAAAAACTTTCTCAAAAAGC
CTAAGGTTTTGTGAGGCTAA

Downstream 100 bases:

>100_bases
ATGGTTTCTATGCTTTTAGTGGGCAGAATTGGTAAAAGCGTGGGGCTTAATGGGGGGTTAAGGCTTCATTTAGAGAGCGA
TTTTCCGGAGTGTTTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MCELDPLNTPFSQAECKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTHPSDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSCKIVVFASKNGDKNPHVLGDQTP

Sequences:

>Translated_115_residues
MCELDPLNTPFSQAECKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTHPSDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSCKIVVFASKNGDKNPHVLGDQTP
>Mature_115_residues
MCELDPLNTPFSQAECKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTHPSDMGHVIGKEGKMVSAIKA
FVSGVKAKDGFSCKIVVFASKNGDKNPHVLGDQTP

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12669; Mature: 12669

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCELDPLNTPFSQAECKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHEEEEEEC
PSDMGHVIGKEGKMVSAIKAFVSGVKAKDGFSCKIVVFASKNGDKNPHVLGDQTP
CCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCELDPLNTPFSQAECKDYSYCVATFLEKYLKKVVSFPQALSVEHTLLEDKVKQITIYTH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHEEEEEEC
PSDMGHVIGKEGKMVSAIKAFVSGVKAKDGFSCKIVVFASKNGDKNPHVLGDQTP
CCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA