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The map label for this gene is 188527908

Identifier: 188527908

GI number: 188527908

Start: 1141523

End: 1142518

Strand: Reverse

Name: 188527908

Synonym: HPSH_05795

Alternate gene names: NA

Gene position: 1142518-1141523 (Counterclockwise)

Preceding gene: 188527909

Following gene: 188527907

Centisome position: 71.03

GC content: 38.15

Gene sequence:

>996_bases
ATGAAAAGGCTTTTTTTTATCCCTTTTATCGCTCCCTTTTTTCTCAATGGGGAGCCTTCAGCGTTTGATTTGCAAAGCGG
GGCTACCAAAAAAGAACTCAAGCAGTTGCAAGTCAATAGTAAGAATTTTTCTAATATTTTGACCAAAATCCATTCGCAAG
TAGAGGCTAACACTCAAGCTCAAGAGGGTCTAAGGAGCGTTTATGAAGGGCAGGCTAATAAGATTAAAGATCTCAATAAC
GCTATCCTTTCCCAAGAAGAATCCTTGCGAACCTTAAAAGCTTTGCAAGAAGTGCAGGCTAACACGCTTAAGCAACAATC
ACAAACTTTAGAGGATTTGAGGAATGAGATTCACGCTAACCAGCAAGCTATCCAGCAGTTAGACAAGCAAAATAAAGAGA
TGAGTGAATTATTGACCAAGTTAAGCCAGGATTTGGTTTCACAAATCGCCTTGATCCAAAAAGCTCTCAAAGAACAAGAG
GAAAAAGCTGAAAAGCCGCTCAAATCAAACGCTCCGGCTGATAAAACCCCCCTTTTGAAAGCCGAATCCCTAAAAAATCA
AGAGAGAAAAACCCAAGAAAAGGCGAAAATTGAGTTTGATAAAGATTTGTCTAAGCAAAAAGAGATTTTTCAAGAAGCTC
TGACCTTTTTAAAAGACAAATCCTATGCAGAAGCCAGAGAGCGTTTGTTGTGGTTAGAAGCCAATAGTTACCGCCTTTAT
TATGTGCGTTATGCACTTGGAGAAGTGGCTTATGGGGAAAAAAAGTATAGAGAAGCGATCAAGTATTACAAAGAGAGCGC
TCTTTTAAATAAAAAAGCGTCTTACATGCCTGTGCTTTTGTGGCATACGGCATGGTCGTTTAAAAAAATCAAAGACGATC
AAAACTATTATAAATTTTTAAACACTTTGCAACACTTGTATCCTTCAAGCGAACAAGCTAAAATGGCAAAAAAAATCTTA
GAAAACAAGGAGAAACACCATCATGCAAAACCATGA

Upstream 100 bases:

>100_bases
ATCAGTTTTGGTGAAACCAAACCCAAATGCACCCAAAAAACTAAAGAATGCTACAAAGAAAACAGAAGAGTGGATGTCAA
ATTAGTGAAGTAATTCTAGG

Downstream 100 bases:

>100_bases
TTTAGAGTCGGTCAAACAAGCCGCTTTGATTGAATATGAAGTGAGGGAGCAGGGGTCTAGCGTTGTGCTAGACAGTAATA
TTTCTAAAGAGCCTTTAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Periplasmic Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; ADP-Heptose-LPS Heptosyltransferase II; Tetratricopeptide TPR_2 Repeat-Containing Protein

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQAQEGLRSVYEGQANKIKDLNN
AILSQEESLRTLKALQEVQANTLKQQSQTLEDLRNEIHANQQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQE
EKAEKPLKSNAPADKTPLLKAESLKNQERKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY
YVRYALGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFLNTLQHLYPSSEQAKMAKKIL
ENKEKHHHAKP

Sequences:

>Translated_331_residues
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQAQEGLRSVYEGQANKIKDLNN
AILSQEESLRTLKALQEVQANTLKQQSQTLEDLRNEIHANQQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQE
EKAEKPLKSNAPADKTPLLKAESLKNQERKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY
YVRYALGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFLNTLQHLYPSSEQAKMAKKIL
ENKEKHHHAKP
>Mature_331_residues
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQAQEGLRSVYEGQANKIKDLNN
AILSQEESLRTLKALQEVQANTLKQQSQTLEDLRNEIHANQQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQE
EKAEKPLKSNAPADKTPLLKAESLKNQERKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY
YVRYALGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFLNTLQHLYPSSEQAKMAKKIL
ENKEKHHHAKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38515; Mature: 38515

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQA
CCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH
QEGLRSVYEGQANKIKDLNNAILSQEESLRTLKALQEVQANTLKQQSQTLEDLRNEIHAN
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQEEKAEKPLKSNAPADKTPLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AESLKNQERKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCEEEE
YVRYALGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
NTLQHLYPSSEQAKMAKKILENKEKHHHAKP
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKRLFFIPFIAPFFLNGEPSAFDLQSGATKKELKQLQVNSKNFSNILTKIHSQVEANTQA
CCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHH
QEGLRSVYEGQANKIKDLNNAILSQEESLRTLKALQEVQANTLKQQSQTLEDLRNEIHAN
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QQAIQQLDKQNKEMSELLTKLSQDLVSQIALIQKALKEQEEKAEKPLKSNAPADKTPLLK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
AESLKNQERKTQEKAKIEFDKDLSKQKEIFQEALTFLKDKSYAEARERLLWLEANSYRLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEECCCEEEE
YVRYALGEVAYGEKKYREAIKYYKESALLNKKASYMPVLLWHTAWSFKKIKDDQNYYKFL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
NTLQHLYPSSEQAKMAKKILENKEKHHHAKP
HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA