| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is porA
Identifier: 188527890
GI number: 188527890
Start: 1125414
End: 1126637
Strand: Direct
Name: porA
Synonym: HPSH_05705
Alternate gene names: 188527890
Gene position: 1125414-1126637 (Clockwise)
Preceding gene: 188527889
Following gene: 188527891
Centisome position: 69.96
GC content: 45.42
Gene sequence:
>1224_bases ATGGCAAGAAGTATTGAATTACAAGAGATAGAGGTGTGGGATGGCAATACCGCTAGCTCTAACGCTTTAAGACAGGCTCA AATTGATGTCATCGCAGCCTATCCTATCACCCCATCAACGCCCATTGTGCAAAATTACGGCTCGTTTAAGGATAATGGCT ATATTGATGGCGAATTTGTTTTAGTGGAATCTGAGCATGCCGCCATGAGTGCATGCGTGGGAGCTGCAGCAGCTGGTGGA AGGGTTAGCACTGCGACTAGCTCTCAAGGTTTGGCGTTAATGGTAGAGGTTTTATACCAGGCTTCTGGCATGCGTTTGCC TATCGTTTTGAATTTAGTCAATCGCGCTTTAGCAGCCCCTTTGAATATCCATGGCGATCATTCTGATATGTATTTAAGCA GGGATTCTGGCTGGATAAGTTTATGCACATGCAACCCCCAAGAAGCTTATGATTTCACTTTAATGGCGTTTAGAATCGCA GAGCATCAAAAGGTGCGCGTGCCCACTATTGTCAATCAAGACGGGTTTTTATGCTCGCACACCGTGCAAAATGTCCGCCC TTTGAGCGATACAGTGGCTTACCAATTCGTAGGCGAATACCAAACCAAGCATTCCCTTTTGGATTTTGATAAGCCGGTAA GCTATGGCGCGCAAGCTGAAGAAGAATGGCATTATGAGCATAAAGCCCAACTCCACCATGCGATCATGAGCGCGTCTTCT GTGATTGAAGAAGTGTTCAATGATTTCGCTAAACTCACCGGCAGACAATACCATTTGACTAAAACTTTCCAGCTAGAAGA CGCTGAAATCGCTATCTTTGCGTTAGGCACTACTTATGAATCAGCGATCGTAGCGGCTAAAGAAATGCGTAAAAAAGGCA TTAAGGCCGGCGTGGCGACCATCCATTCCTTACGCCCCTTCCCTTATGAAAGATTAGGGCAGGATTTGAAAAACCTTAAA GCTTTAGCGATTTTAGATAAGAGCTCTCCAGCGGGCGCTATGGGAGCGATGTTTAATGAAGTAACGAGCGCGGTGTATCA AACGCAAGGGACTAAACACCCCGTGGTGTCTAACTATATCTATGGTTTAGGCGAAAGGGATATGACAATCGCGCATTTAT GCGGAATTTTTGAAGAAATCAATGAAGACGCTCTTAAAGGCACGCTCACGCACCCTACCCAACAATTCGTAGGCTTGCAC GGTCCTAAAATGAGCTTTTTTTAA
Upstream 100 bases:
>100_bases CCCTAAATCGCTATGGATGTTTGAAGAACAAATTGAGCTTGCTAGCGCTCTCACTCAATGGCCGCAAAAACAAGAAAAGA AAAAATCGTAAGGAAAAAAT
Downstream 100 bases:
>100_bases AAAGGAAATATCATGGTAAAAGAAGTCAAAACACTCAAAGGTTTTAGCCAAAGCGCTGAAAAATTCCAAGGCTCACACTT GCTTTGTCCGGGTTGTGGGC
Product: pyruvate flavodoxin oxidoreductase subunit alpha
Products: NA
Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLH GPKMSFF
Sequences:
>Translated_407_residues MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLH GPKMSFF >Mature_406_residues ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGGR VSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAE HQKVRVPTIVNQDGFLCSHTVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSV IEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLKA LAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLHG PKMSFF
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG0674
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787642, Length=393, Percent_Identity=30.7888040712468, Blast_Score=158, Evalue=8e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002880 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 44714; Mature: 44583
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00099 THIOLASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV CCCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP EEECCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH TVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH YGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV CCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP EEECCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH TVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH YGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550425; 10360571; 8305426 [H]