Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is porA

Identifier: 188527890

GI number: 188527890

Start: 1125414

End: 1126637

Strand: Direct

Name: porA

Synonym: HPSH_05705

Alternate gene names: 188527890

Gene position: 1125414-1126637 (Clockwise)

Preceding gene: 188527889

Following gene: 188527891

Centisome position: 69.96

GC content: 45.42

Gene sequence:

>1224_bases
ATGGCAAGAAGTATTGAATTACAAGAGATAGAGGTGTGGGATGGCAATACCGCTAGCTCTAACGCTTTAAGACAGGCTCA
AATTGATGTCATCGCAGCCTATCCTATCACCCCATCAACGCCCATTGTGCAAAATTACGGCTCGTTTAAGGATAATGGCT
ATATTGATGGCGAATTTGTTTTAGTGGAATCTGAGCATGCCGCCATGAGTGCATGCGTGGGAGCTGCAGCAGCTGGTGGA
AGGGTTAGCACTGCGACTAGCTCTCAAGGTTTGGCGTTAATGGTAGAGGTTTTATACCAGGCTTCTGGCATGCGTTTGCC
TATCGTTTTGAATTTAGTCAATCGCGCTTTAGCAGCCCCTTTGAATATCCATGGCGATCATTCTGATATGTATTTAAGCA
GGGATTCTGGCTGGATAAGTTTATGCACATGCAACCCCCAAGAAGCTTATGATTTCACTTTAATGGCGTTTAGAATCGCA
GAGCATCAAAAGGTGCGCGTGCCCACTATTGTCAATCAAGACGGGTTTTTATGCTCGCACACCGTGCAAAATGTCCGCCC
TTTGAGCGATACAGTGGCTTACCAATTCGTAGGCGAATACCAAACCAAGCATTCCCTTTTGGATTTTGATAAGCCGGTAA
GCTATGGCGCGCAAGCTGAAGAAGAATGGCATTATGAGCATAAAGCCCAACTCCACCATGCGATCATGAGCGCGTCTTCT
GTGATTGAAGAAGTGTTCAATGATTTCGCTAAACTCACCGGCAGACAATACCATTTGACTAAAACTTTCCAGCTAGAAGA
CGCTGAAATCGCTATCTTTGCGTTAGGCACTACTTATGAATCAGCGATCGTAGCGGCTAAAGAAATGCGTAAAAAAGGCA
TTAAGGCCGGCGTGGCGACCATCCATTCCTTACGCCCCTTCCCTTATGAAAGATTAGGGCAGGATTTGAAAAACCTTAAA
GCTTTAGCGATTTTAGATAAGAGCTCTCCAGCGGGCGCTATGGGAGCGATGTTTAATGAAGTAACGAGCGCGGTGTATCA
AACGCAAGGGACTAAACACCCCGTGGTGTCTAACTATATCTATGGTTTAGGCGAAAGGGATATGACAATCGCGCATTTAT
GCGGAATTTTTGAAGAAATCAATGAAGACGCTCTTAAAGGCACGCTCACGCACCCTACCCAACAATTCGTAGGCTTGCAC
GGTCCTAAAATGAGCTTTTTTTAA

Upstream 100 bases:

>100_bases
CCCTAAATCGCTATGGATGTTTGAAGAACAAATTGAGCTTGCTAGCGCTCTCACTCAATGGCCGCAAAAACAAGAAAAGA
AAAAATCGTAAGGAAAAAAT

Downstream 100 bases:

>100_bases
AAAGGAAATATCATGGTAAAAGAAGTCAAAACACTCAAAGGTTTTAGCCAAAGCGCTGAAAAATTCCAAGGCTCACACTT
GCTTTGTCCGGGTTGTGGGC

Product: pyruvate flavodoxin oxidoreductase subunit alpha

Products: NA

Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG
RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA
EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK
ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLH
GPKMSFF

Sequences:

>Translated_407_residues
MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGG
RVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIA
EHQKVRVPTIVNQDGFLCSHTVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLK
ALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLH
GPKMSFF
>Mature_406_residues
ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFVLVESEHAAMSACVGAAAAGGR
VSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAPLNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAE
HQKVRVPTIVNQDGFLCSHTVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASSV
IEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVATIHSLRPFPYERLGQDLKNLKA
LAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYIYGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLHG
PKMSFF

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787642, Length=393, Percent_Identity=30.7888040712468, Blast_Score=158, Evalue=8e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.1 [H]

Molecular weight: Translated: 44714; Mature: 44583

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV
CCCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE
LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP
EEECCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH
CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH
TVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT
HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI
HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF
HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARSIELQEIEVWDGNTASSNALRQAQIDVIAAYPITPSTPIVQNYGSFKDNGYIDGEFV
CCCCEEEEEEEECCCCCCCHHHHHEEEEEEEEECCCCCCCHHHCCCCCCCCCEECCEEE
LVESEHAAMSACVGAAAAGGRVSTATSSQGLALMVEVLYQASGMRLPIVLNLVNRALAAP
EEECCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC
LNIHGDHSDMYLSRDSGWISLCTCNPQEAYDFTLMAFRIAEHQKVRVPTIVNQDGFLCSH
CEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHEEEEHHCCCEEECCEEECCCCCCHHH
TVQNVRPLSDTVAYQFVGEYQTKHSLLDFDKPVSYGAQAEEEWHYEHKAQLHHAIMSASS
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VIEEVFNDFAKLTGRQYHLTKTFQLEDAEIAIFALGTTYESAIVAAKEMRKKGIKAGVAT
HHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
IHSLRPFPYERLGQDLKNLKALAILDKSSPAGAMGAMFNEVTSAVYQTQGTKHPVVSNYI
HHHCCCCCHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHH
YGLGERDMTIAHLCGIFEEINEDALKGTLTHPTQQFVGLHGPKMSFF
HCCCCCCHHHHHHHHHHHHHCHHHHCCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8550425; 10360571; 8305426 [H]