Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527816

Identifier: 188527816

GI number: 188527816

Start: 1044507

End: 1045676

Strand: Reverse

Name: 188527816

Synonym: HPSH_05305

Alternate gene names: NA

Gene position: 1045676-1044507 (Counterclockwise)

Preceding gene: 188527817

Following gene: 188527815

Centisome position: 65.01

GC content: 36.84

Gene sequence:

>1170_bases
ATGGTTATTGTTTTAGTCGTGGATAGCTTTAAAGATACTAGTAATGGCACTTCTATGACGGCGTTTCGTTTTTTTGAAAC
GCTGAAAAAAAGAGGGCATGTTATGAGGGTGGTTGCCCCTTATGTGGATAATTTAGGGAGTGAAGAAGAGGGGTATTACA
ACCTTAAAGAGCGCTATATCCCCCTAGTTACAGAAATTTCACACAAACAACACATTCTTTTTGCTAAACCCGATGAAAAA
ATCTTAAGAAAGGCTTTTAAGGGAGCGGATATGATCCATACTTATTTGCCTTTTTTGCTAGAAAAAACAGCCGTAAAAAT
CGCGCGAGAAATGCAAGTGCCTTATATTGGCTCTTTCCATTTACAGCCAGAGCATATTTCTTATAACATGAAATTGGGGT
GGTTTTCTTGGTTTAACATGATGCTTTTTTCGTGGTTTAAATCTTCGCATTACCGCTATATCCATCATATCCATTGCCCA
TCAAAATTCATTGTAGAAGAATTAGAAAAATACAACTATGGAGGGAAAAAATACGCTATTTCTAACGGCTTTGATCCCAT
GTTTAGATTTGAACACCCGCAAAAAAGCCTTTTTGACACCACACCCTTTAAAATCGCTATGGTAGGGCGCTATTCTAATG
AAAAAAATCAAAGCGTTTTAATCAAAGCGGTTGCTTTAAGCAAATACAAACAAGATATTGTATTATTGCTCAAAGGTAAA
GGGCCTGATGAGAAAAAAATCAAACTTTTAGCCCAAAAACTAGGCGTAAAAACGGAGTTTGGGTTTGTCAATTCCAATGA
ATTGTTAGAGATTTTAAAAACTTGCACCCTCTATGCGCACACAGCCAATGTGGAAAGCGAAGCGATTGCGTGTTTAGAAG
CTATTAGCGTGGGGATTGTGCCTATTATCGCCAATAGCCCTTTAAGCGCGACCAGGCAATTTGCACTAGATGAACGATCG
CTATTTGAGCCTAATAACGCTAAAGATTTGAGCGCTAAAATAGACTGGTGGTTAGAAAACAAGCTTGAAAGAGAAAGGAT
GCAAAATAAATACGCTAAAAGCGCTTTAAACTACACTTTAGAAAATTCAGTCATTCAAATTGAAAAAGTTTATGAAGAAG
CGATCAAAGATTTTAAAAATAACCCCAGTCTTTTTAAAACCTTATCGTAA

Upstream 100 bases:

>100_bases
AGAGGCGTTTGTGTTAGACATTCAGGTTTTAGAGGGACTGATAGAAATCGTGGTGTTTGATAAAAAGCCTTTCAAATTCA
ATTTTAAAGAAGAGTAGTTA

Downstream 100 bases:

>100_bases
CAAAAGGATAAAAAATGCAAGAAGTCCATGATTATGGGATTAATTTTTGGAGCAATAACGAATTTAAGATAGAAAAAGGC
TTGGTTAAAGTTTGCCATGG

Product: type 1 capsular polysaccharide biosynthesis protein J

Products: NA

Alternate protein names: Glycosyl Transferase; Group 1 Glycosyl Transferase; Type 1 Capsular Polysaccharide Biosynthesis Protein J; Cholesterol Alpha-Glucosyltransferase; 1 2-Diacylglycerol 3-Glucosyltransferase; Type 1 Capsular Polysaccharide Biosynthesis Protein; Glucosyltransferase; Lipopolysaccharide Biosynthesis Protein

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MVIVLVVDSFKDTSNGTSMTAFRFFETLKKRGHVMRVVAPYVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEK
ILRKAFKGADMIHTYLPFLLEKTAVKIAREMQVPYIGSFHLQPEHISYNMKLGWFSWFNMMLFSWFKSSHYRYIHHIHCP
SKFIVEELEKYNYGGKKYAISNGFDPMFRFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGK
GPDEKKIKLLAQKLGVKTEFGFVNSNELLEILKTCTLYAHTANVESEAIACLEAISVGIVPIIANSPLSATRQFALDERS
LFEPNNAKDLSAKIDWWLENKLERERMQNKYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPSLFKTLS

Sequences:

>Translated_389_residues
MVIVLVVDSFKDTSNGTSMTAFRFFETLKKRGHVMRVVAPYVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEK
ILRKAFKGADMIHTYLPFLLEKTAVKIAREMQVPYIGSFHLQPEHISYNMKLGWFSWFNMMLFSWFKSSHYRYIHHIHCP
SKFIVEELEKYNYGGKKYAISNGFDPMFRFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGK
GPDEKKIKLLAQKLGVKTEFGFVNSNELLEILKTCTLYAHTANVESEAIACLEAISVGIVPIIANSPLSATRQFALDERS
LFEPNNAKDLSAKIDWWLENKLERERMQNKYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPSLFKTLS
>Mature_389_residues
MVIVLVVDSFKDTSNGTSMTAFRFFETLKKRGHVMRVVAPYVDNLGSEEEGYYNLKERYIPLVTEISHKQHILFAKPDEK
ILRKAFKGADMIHTYLPFLLEKTAVKIAREMQVPYIGSFHLQPEHISYNMKLGWFSWFNMMLFSWFKSSHYRYIHHIHCP
SKFIVEELEKYNYGGKKYAISNGFDPMFRFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGK
GPDEKKIKLLAQKLGVKTEFGFVNSNELLEILKTCTLYAHTANVESEAIACLEAISVGIVPIIANSPLSATRQFALDERS
LFEPNNAKDLSAKIDWWLENKLERERMQNKYAKSALNYTLENSVIQIEKVYEEAIKDFKNNPSLFKTLS

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44989; Mature: 44989

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIVLVVDSFKDTSNGTSMTAFRFFETLKKRGHVMRVVAPYVDNLGSEEEGYYNLKERYI
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCHHHHCC
PLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMQVPYIGSFH
HHHHCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LQPEHISYNMKLGWFSWFNMMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKKYAI
ECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEE
SNGFDPMFRFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGK
CCCCCCCEECCCCHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHCCCEEEEEECC
GPDEKKIKLLAQKLGVKTEFGFVNSNELLEILKTCTLYAHTANVESEAIACLEAISVGIV
CCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCEE
PIIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNKYAKSALNYTL
EEEECCCHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENSVIQIEKVYEEAIKDFKNNPSLFKTLS
CCCHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MVIVLVVDSFKDTSNGTSMTAFRFFETLKKRGHVMRVVAPYVDNLGSEEEGYYNLKERYI
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHCCCCCCCCCCCHHHHCC
PLVTEISHKQHILFAKPDEKILRKAFKGADMIHTYLPFLLEKTAVKIAREMQVPYIGSFH
HHHHCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LQPEHISYNMKLGWFSWFNMMLFSWFKSSHYRYIHHIHCPSKFIVEELEKYNYGGKKYAI
ECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEE
SNGFDPMFRFEHPQKSLFDTTPFKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGK
CCCCCCCEECCCCHHHHCCCCCEEEEEEECCCCCCCCEEEEHHHHHHHHCCCEEEEEECC
GPDEKKIKLLAQKLGVKTEFGFVNSNELLEILKTCTLYAHTANVESEAIACLEAISVGIV
CCCHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCEE
PIIANSPLSATRQFALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNKYAKSALNYTL
EEEECCCHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ENSVIQIEKVYEEAIKDFKNNPSLFKTLS
CCCHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA