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The map label for this gene is fliY [C]

Identifier: 188527762

GI number: 188527762

Start: 982172

End: 982948

Strand: Reverse

Name: fliY [C]

Synonym: HPSH_04945

Alternate gene names: 188527762

Gene position: 982948-982172 (Counterclockwise)

Preceding gene: 188527763

Following gene: 188527761

Centisome position: 61.11

GC content: 40.8

Gene sequence:

>777_bases
ATGAAAAAAGTTTTATTTCTCTTTTTACTGGTAATAAGCTTTTTTGGGGGTTTTTTGAACGCTTCTAGCTTGTATGAAAA
ACTTATCAATAAAGAAACGATCAGCGTTGGCACAGAAGGCATTTACCCCCCTTTCACTTACCATAATAAAGAAGGCAAGC
TCACCGGCTATGATGTGGAAGTGGCTAGGGAGTTGGCTAAAGAGCTTGGCGTGAAAATCAAATTCCACGAAACTTCATGG
GATATTATGCTTACAGGCTTGAAATCGGGGCGTTTTGATATGGTCGCTAACCAAGTGAGTTTGACGACTAAAAAACGCCA
AGCGACTTTTGATAAAAGCTTGCCTTATAGCTATTCAGGAACGATCATGCTGGTTAGAAAAGATGAAAACCGCATTAAAG
GCATTCAAGACATTAAGGGTTTGAGGGCGGCTAACACTTTAAGCTCCACTTATGGGGAAATCGCTTTCAAATACGACGCT
CAAATCGTTTCGGTGGATTCTATGGCGCAAGCTTTGTTGTTGGTGGCGCAAAAACGAGCCGATTTGACCTTAAATAGTTC
TTTAGCGATCTTAAACTACCTAAACACCCACAAAAACAACCCCTTTAAAATCGCATGGGAGTCCAAAGAAAAAGATGGGG
GTGCTTCCTTTGTCATCAACAAGCACCAAGAAAAAGCCTTAGAGCTTATCAACCAGGCGATGCAAAGATTGATAGATAAA
GGGGTTTTAAAACGCTTAGGCGAACAATTTTTTGGAAAAGATGTCAGCCAGCCATAA

Upstream 100 bases:

>100_bases
TATCCAAACGCTTGGAGCGCGTCTATATTTAAAATCAAACCATGCAAAATTTTTATTTTGCGCTAGAATGCGCGAAAAAC
AAAATAGGATTGATTAAAAA

Downstream 100 bases:

>100_bases
TCTGTCTTTGTTTTTTGAATCTTTAGATTTGAGCAAGGAGCGTTTGGAATTATTATTAGAGGCTTTCTACCCCATGCTAA
AAGCCGCTTTTTGCATTTCT

Product: ABC-type polar amino acid transport,periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKKVLFLFLLVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVKIKFHETSW
DIMLTGLKSGRFDMVANQVSLTTKKRQATFDKSLPYSYSGTIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEIAFKYDA
QIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIDK
GVLKRLGEQFFGKDVSQP

Sequences:

>Translated_258_residues
MKKVLFLFLLVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVKIKFHETSW
DIMLTGLKSGRFDMVANQVSLTTKKRQATFDKSLPYSYSGTIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEIAFKYDA
QIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIDK
GVLKRLGEQFFGKDVSQP
>Mature_258_residues
MKKVLFLFLLVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVKIKFHETSW
DIMLTGLKSGRFDMVANQVSLTTKKRQATFDKSLPYSYSGTIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEIAFKYDA
QIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIDK
GVLKRLGEQFFGKDVSQP

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=264, Percent_Identity=34.469696969697, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1787085, Length=259, Percent_Identity=23.9382239382239, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788648, Length=233, Percent_Identity=22.7467811158798, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1788649, Length=99, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1787031, Length=223, Percent_Identity=24.2152466367713, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787088, Length=262, Percent_Identity=23.6641221374046, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29000; Mature: 29000

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLFLFLLVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVE
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCCCCCCCEECCCCCEECCHHH
VARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQATFDKSLPYSYSG
HHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEIAFKYDAQIVSVDSMAQALLLVAQKRA
EEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHCEEEEECCEEEEHHHHHHHHHHHHHHHC
DLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIDK
CEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
GVLKRLGEQFFGKDVSQP
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKKVLFLFLLVISFFGGFLNASSLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVE
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHEECCCCCCCCCCCEECCCCCEECCHHH
VARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQATFDKSLPYSYSG
HHHHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
TIMLVRKDENRIKGIQDIKGLRAANTLSSTYGEIAFKYDAQIVSVDSMAQALLLVAQKRA
EEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHCEEEEECCEEEEHHHHHHHHHHHHHHHC
DLTLNSSLAILNYLNTHKNNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLIDK
CEEECCHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHH
GVLKRLGEQFFGKDVSQP
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]