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The map label for this gene is 188527758

Identifier: 188527758

GI number: 188527758

Start: 977473

End: 979458

Strand: Direct

Name: 188527758

Synonym: HPSH_04925

Alternate gene names: NA

Gene position: 977473-979458 (Clockwise)

Preceding gene: 188527757

Following gene: 188527769

Centisome position: 60.77

GC content: 38.52

Gene sequence:

>1986_bases
ATGAGAAAACTATTCACTTCGTTTTTATTATTCAGTGCTTTAGAAGCTAATGAGAAAAATGGCTTTTTCATAGAAGCCGG
GTTTGAAACCGGGCTGTTAGAAGGCACACAAACGCAAGAACAAAGACACACCACCACAAAAAACACTTACGCAACTTATA
ATTATTTACCCACAGACGCCGTTTTAAAAAGAGCGGCTAATTTATTCACAGACGCTAAATCTATATCACAATTGAACTTT
TCATCTTTATCCCCTGTTAAAGTGCTGTATATTGGTGGTAAATTAACTATAGAAAACTTCCTACCTTATAATCTGAGCAA
TGTTAAGCTTAGTTTCACAGACGCTCAAGGCAATATGATCGATCTAGGCGTGATAGAAACTATCCCCAAACACTCTAAGA
TCGTTTTACCTGGGGAAGCGTTTGATAGTCTAAAAGAGGCGTTTGATAAAATTGACCCCTATACTTTCTTTTTTCCAAAA
TTTGAAGCCACTAGCACTTCTGTTTCTGACGCTAACACGCAAAGGGTGTTTGAAACGCTCAATAAGATTAAAACAAATCT
TATCATGAAATATAGTAATGAAAATCCAAACAATTTCAACACTTGTCCTTACAACAATAATGGTAATACAAAAAATGATT
GTTGGCAACCTTTTACCCCACAAACCGCAGAGGAATTCACTAATTTGATGTTGAACATGATCGCTGTGTTAGACTCTCAA
TCTTGGGGCGATGCGATTTTAAACGCTCCTTTTGAATTCACTAACAGCTCAACAGATTGCGATAATGATTCTTCAAAATG
CGTAAATCCCGGGATAAATGGGCGTGTTGACTCTAAAGTTGATCAACAATATGTGTTAAACAAGCAGGGTATTGTCAATA
ATTTTAGAAAAAAAATAGAAATTGATGCGGTCGTTTTAAAAAATTCAGGGGTTGTAGGGTTAGCCAATGGGTATGGCAAT
GATGGTGAATATGGCACATTGGGGGTAGAAGCTTATGCATTGGAACCCCAAAAACTCTTTGGCAACAACCTTAAGACTAT
CAATTTAGAGGATTTAAGAACCATCTTGCATGAATTCAGCCACACTAAAGGCTATGGGCATAACGGGAACATGACTTATC
AAAGGGTGCCAACCGGTCAAAATGAAAACGGCAAGCCAAAAGATTCTGATGGCCTCCCCTATAATGTGTGTTCGCTTTAT
GGGGGTCAAGGTCAGAGTGCTTTCCCTAGCAACTACCCTAATTCAATCTATCACAATTGCGCGGATGTTCCGGCTGGCTT
TTTAGGGGTAACAGCAGCGGTTTGGCAGCAGCTCATCAATCAAAACGCCTTGCCGATCAATTTCGCTAATCTTGGTAGTC
AAACAAACTACAATCTAAACGCCAGTTTGAACACGCAAGATTTAGCCAACTCCATGCTCAGCACCATTCAAAAAACCTTT
GTAACTTCTAGCGTTACTAACCACTATTTTTCAAGCGCTTCGCAAAGTTTTAGAAGCCCTATTTTAGGGGTTAATGCTAA
AATAGGCTATCAAAACTACTTCAATGATTTCATAGGGTTGGCTTATTATGGCATCATCAAATACAATTACGCTAAAGCTA
GTGATCAAAAAGTCCAGCAACTAAGCTATGGTGGGGGGATAGATTTATTGGTGGATTTCATCACCACTTACTCCAATAAA
AATAACCCTATAGACATTCAAACCAGAAGGAATTTTTCTTCATCCTTTGGTATCTTTGGGGGGTTAAGGGGCTTGTATAA
CAGCTATTATGCGCTCAATAAAGTCAAAGGAAGCGGTAATTTAGATGTGGCTACTGGGTTGAACTACCGCTATAAGCATT
CTAAATATTCTGTAGGGATTAGCATTCCTTTAATCCAAAGAAAAGCTAGCGTCGTTTCTAGCAATGGCGATTATACGAAC
TCTCTTGTTTTCAATGAAGGGGCTAGCCATTTTAAGGTGTTTTTTAATTACGGGTGGGTGTTTTAA

Upstream 100 bases:

>100_bases
GAAATACCAATCCCTTATAAAAGCTTTAAATTTCAAAAAATAAACAAACAATCCCCTTAAATGGTATAATAAAGACACTA
TAAACTAAAAAGAAATAACC

Downstream 100 bases:

>100_bases
AACGCTAAAAGATTAAAGAGCTTAATCAAACGATGATTTTATTGTGATGCGCGGGGTTAAGGATTTCATCACCACTAAAA
ACCCACCAACACTATCGGCT

Product: putative outer membrane protein HomB

Products: NA

Alternate protein names: Hom Family Outer Membrane Protein; Outer Membrane Protein HomA; Outer Membrane Protein HomD; Outer Membrane Protein HomB

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MRKLFTSFLLFSALEANEKNGFFIEAGFETGLLEGTQTQEQRHTTTKNTYATYNYLPTDAVLKRAANLFTDAKSISQLNF
SSLSPVKVLYIGGKLTIENFLPYNLSNVKLSFTDAQGNMIDLGVIETIPKHSKIVLPGEAFDSLKEAFDKIDPYTFFFPK
FEATSTSVSDANTQRVFETLNKIKTNLIMKYSNENPNNFNTCPYNNNGNTKNDCWQPFTPQTAEEFTNLMLNMIAVLDSQ
SWGDAILNAPFEFTNSSTDCDNDSSKCVNPGINGRVDSKVDQQYVLNKQGIVNNFRKKIEIDAVVLKNSGVVGLANGYGN
DGEYGTLGVEAYALEPQKLFGNNLKTINLEDLRTILHEFSHTKGYGHNGNMTYQRVPTGQNENGKPKDSDGLPYNVCSLY
GGQGQSAFPSNYPNSIYHNCADVPAGFLGVTAAVWQQLINQNALPINFANLGSQTNYNLNASLNTQDLANSMLSTIQKTF
VTSSVTNHYFSSASQSFRSPILGVNAKIGYQNYFNDFIGLAYYGIIKYNYAKASDQKVQQLSYGGGIDLLVDFITTYSNK
NNPIDIQTRRNFSSSFGIFGGLRGLYNSYYALNKVKGSGNLDVATGLNYRYKHSKYSVGISIPLIQRKASVVSSNGDYTN
SLVFNEGASHFKVFFNYGWVF

Sequences:

>Translated_661_residues
MRKLFTSFLLFSALEANEKNGFFIEAGFETGLLEGTQTQEQRHTTTKNTYATYNYLPTDAVLKRAANLFTDAKSISQLNF
SSLSPVKVLYIGGKLTIENFLPYNLSNVKLSFTDAQGNMIDLGVIETIPKHSKIVLPGEAFDSLKEAFDKIDPYTFFFPK
FEATSTSVSDANTQRVFETLNKIKTNLIMKYSNENPNNFNTCPYNNNGNTKNDCWQPFTPQTAEEFTNLMLNMIAVLDSQ
SWGDAILNAPFEFTNSSTDCDNDSSKCVNPGINGRVDSKVDQQYVLNKQGIVNNFRKKIEIDAVVLKNSGVVGLANGYGN
DGEYGTLGVEAYALEPQKLFGNNLKTINLEDLRTILHEFSHTKGYGHNGNMTYQRVPTGQNENGKPKDSDGLPYNVCSLY
GGQGQSAFPSNYPNSIYHNCADVPAGFLGVTAAVWQQLINQNALPINFANLGSQTNYNLNASLNTQDLANSMLSTIQKTF
VTSSVTNHYFSSASQSFRSPILGVNAKIGYQNYFNDFIGLAYYGIIKYNYAKASDQKVQQLSYGGGIDLLVDFITTYSNK
NNPIDIQTRRNFSSSFGIFGGLRGLYNSYYALNKVKGSGNLDVATGLNYRYKHSKYSVGISIPLIQRKASVVSSNGDYTN
SLVFNEGASHFKVFFNYGWVF
>Mature_661_residues
MRKLFTSFLLFSALEANEKNGFFIEAGFETGLLEGTQTQEQRHTTTKNTYATYNYLPTDAVLKRAANLFTDAKSISQLNF
SSLSPVKVLYIGGKLTIENFLPYNLSNVKLSFTDAQGNMIDLGVIETIPKHSKIVLPGEAFDSLKEAFDKIDPYTFFFPK
FEATSTSVSDANTQRVFETLNKIKTNLIMKYSNENPNNFNTCPYNNNGNTKNDCWQPFTPQTAEEFTNLMLNMIAVLDSQ
SWGDAILNAPFEFTNSSTDCDNDSSKCVNPGINGRVDSKVDQQYVLNKQGIVNNFRKKIEIDAVVLKNSGVVGLANGYGN
DGEYGTLGVEAYALEPQKLFGNNLKTINLEDLRTILHEFSHTKGYGHNGNMTYQRVPTGQNENGKPKDSDGLPYNVCSLY
GGQGQSAFPSNYPNSIYHNCADVPAGFLGVTAAVWQQLINQNALPINFANLGSQTNYNLNASLNTQDLANSMLSTIQKTF
VTSSVTNHYFSSASQSFRSPILGVNAKIGYQNYFNDFIGLAYYGIIKYNYAKASDQKVQQLSYGGGIDLLVDFITTYSNK
NNPIDIQTRRNFSSSFGIFGGLRGLYNSYYALNKVKGSGNLDVATGLNYRYKHSKYSVGISIPLIQRKASVVSSNGDYTN
SLVFNEGASHFKVFFNYGWVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73317; Mature: 73317

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLFTSFLLFSALEANEKNGFFIEAGFETGLLEGTQTQEQRHTTTKNTYATYNYLPTDA
CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCHHH
VLKRAANLFTDAKSISQLNFSSLSPVKVLYIGGKLTIENFLPYNLSNVKLSFTDAQGNMI
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEEEECCCCEE
DLGVIETIPKHSKIVLPGEAFDSLKEAFDKIDPYTFFFPKFEATSTSVSDANTQRVFETL
EEHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
NKIKTNLIMKYSNENPNNFNTCPYNNNGNTKNDCWQPFTPQTAEEFTNLMLNMIAVLDSQ
HHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
SWGDAILNAPFEFTNSSTDCDNDSSKCVNPGINGRVDSKVDQQYVLNKQGIVNNFRKKIE
CCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHEE
IDAVVLKNSGVVGLANGYGNDGEYGTLGVEAYALEPQKLFGNNLKTINLEDLRTILHEFS
EEEEEEECCCEEEECCCCCCCCCEEEEEEEEEEECHHHHHCCCCCEEEHHHHHHHHHHHH
HTKGYGHNGNMTYQRVPTGQNENGKPKDSDGLPYNVCSLYGGQGQSAFPSNYPNSIYHNC
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHEEECCCCCCCCCCCCCHHHHHHH
ADVPAGFLGVTAAVWQQLINQNALPINFANLGSQTNYNLNASLNTQDLANSMLSTIQKTF
HHCCCHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
VTSSVTNHYFSSASQSFRSPILGVNAKIGYQNYFNDFIGLAYYGIIKYNYAKASDQKVQQ
HHHHHHHHHHHHHHHHHCCCCEECCEEECHHHHHHHHHHHHHHHHEEEECCCCCHHHHHH
LSYGGGIDLLVDFITTYSNKNNPIDIQTRRNFSSSFGIFGGLRGLYNSYYALNKVKGSGN
HHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCCC
LDVATGLNYRYKHSKYSVGISIPLIQRKASVVSSNGDYTNSLVFNEGASHFKVFFNYGWV
EEEEECCCEEEECCEEEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCC
F
C
>Mature Secondary Structure
MRKLFTSFLLFSALEANEKNGFFIEAGFETGLLEGTQTQEQRHTTTKNTYATYNYLPTDA
CHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCHHH
VLKRAANLFTDAKSISQLNFSSLSPVKVLYIGGKLTIENFLPYNLSNVKLSFTDAQGNMI
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEECCCCCCCCCCEEEEEEECCCCEE
DLGVIETIPKHSKIVLPGEAFDSLKEAFDKIDPYTFFFPKFEATSTSVSDANTQRVFETL
EEHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
NKIKTNLIMKYSNENPNNFNTCPYNNNGNTKNDCWQPFTPQTAEEFTNLMLNMIAVLDSQ
HHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
SWGDAILNAPFEFTNSSTDCDNDSSKCVNPGINGRVDSKVDQQYVLNKQGIVNNFRKKIE
CCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHEE
IDAVVLKNSGVVGLANGYGNDGEYGTLGVEAYALEPQKLFGNNLKTINLEDLRTILHEFS
EEEEEEECCCEEEECCCCCCCCCEEEEEEEEEEECHHHHHCCCCCEEEHHHHHHHHHHHH
HTKGYGHNGNMTYQRVPTGQNENGKPKDSDGLPYNVCSLYGGQGQSAFPSNYPNSIYHNC
CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHEEECCCCCCCCCCCCCHHHHHHH
ADVPAGFLGVTAAVWQQLINQNALPINFANLGSQTNYNLNASLNTQDLANSMLSTIQKTF
HHCCCHHHHHHHHHHHHHHCCCCCEEEHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
VTSSVTNHYFSSASQSFRSPILGVNAKIGYQNYFNDFIGLAYYGIIKYNYAKASDQKVQQ
HHHHHHHHHHHHHHHHHCCCCEECCEEECHHHHHHHHHHHHHHHHEEEECCCCCHHHHHH
LSYGGGIDLLVDFITTYSNKNNPIDIQTRRNFSSSFGIFGGLRGLYNSYYALNKVKGSGN
HHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHEEEEECCCCC
LDVATGLNYRYKHSKYSVGISIPLIQRKASVVSSNGDYTNSLVFNEGASHFKVFFNYGWV
EEEEECCCEEEECCEEEEEEEEHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEECCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA