| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527728
Identifier: 188527728
GI number: 188527728
Start: 935204
End: 935503
Strand: Reverse
Name: 188527728
Synonym: HPSH_04755
Alternate gene names: NA
Gene position: 935503-935204 (Counterclockwise)
Preceding gene: 188527729
Following gene: 188527727
Centisome position: 58.16
GC content: 38.67
Gene sequence:
>300_bases ATGAAAATGGTTCATTTTTTAGAGGGCGTTCATTTTGAAAAGCTCCACATTGAAGCGTTGAGTGAAAATTCTTCCAATAA GGAAATGCGCATTTGCATGCCCAAAGGAGCGATCATAGACAAACACAAGGCCCCGGGAGCTATCAGCGTGCAGGTTTTAG AGGGCAAAATCCTTTTTGAAGCCAAAAATGAAAAAATAGAAATGCCAAAAGGAGCGTTAATCAGCCTAGAAGCTCAAGTT TTGCATCGTTTGGACGCTTTAGAAAATAGCGTTATAAGGCTATCTTTAAGTAAAAAATAA
Upstream 100 bases:
>100_bases GACGCTAAAGTTAAGGTTTTATTAATCCCTACTGATGAAGAGCTAGAAATCGCTTTACAAGCGAAAGAAATAGCAGAAAA ATTAAAATAAAGGTTGTTTG
Downstream 100 bases:
>100_bases GGAAAATGAAATGAAAATGAAACGATGAAAGTTGTTTTATGAATACTTGGTATTTGCTTTTAACCATAATTTTATTAATC ATCATCTGGAGGATTATTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 99
Protein sequence:
>99_residues MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFEAKNEKIEMPKGALISLEAQV LHRLDALENSVIRLSLSKK
Sequences:
>Translated_99_residues MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFEAKNEKIEMPKGALISLEAQV LHRLDALENSVIRLSLSKK >Mature_99_residues MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFEAKNEKIEMPKGALISLEAQV LHRLDALENSVIRLSLSKK
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11087; Mature: 11087
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFE CCHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECEEEEE AKNEKIEMPKGALISLEAQVLHRLDALENSVIRLSLSKK ECCCEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEEECC >Mature Secondary Structure MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFE CCHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECEEEEE AKNEKIEMPKGALISLEAQVLHRLDALENSVIRLSLSKK ECCCEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA