Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527728

Identifier: 188527728

GI number: 188527728

Start: 935204

End: 935503

Strand: Reverse

Name: 188527728

Synonym: HPSH_04755

Alternate gene names: NA

Gene position: 935503-935204 (Counterclockwise)

Preceding gene: 188527729

Following gene: 188527727

Centisome position: 58.16

GC content: 38.67

Gene sequence:

>300_bases
ATGAAAATGGTTCATTTTTTAGAGGGCGTTCATTTTGAAAAGCTCCACATTGAAGCGTTGAGTGAAAATTCTTCCAATAA
GGAAATGCGCATTTGCATGCCCAAAGGAGCGATCATAGACAAACACAAGGCCCCGGGAGCTATCAGCGTGCAGGTTTTAG
AGGGCAAAATCCTTTTTGAAGCCAAAAATGAAAAAATAGAAATGCCAAAAGGAGCGTTAATCAGCCTAGAAGCTCAAGTT
TTGCATCGTTTGGACGCTTTAGAAAATAGCGTTATAAGGCTATCTTTAAGTAAAAAATAA

Upstream 100 bases:

>100_bases
GACGCTAAAGTTAAGGTTTTATTAATCCCTACTGATGAAGAGCTAGAAATCGCTTTACAAGCGAAAGAAATAGCAGAAAA
ATTAAAATAAAGGTTGTTTG

Downstream 100 bases:

>100_bases
GGAAAATGAAATGAAAATGAAACGATGAAAGTTGTTTTATGAATACTTGGTATTTGCTTTTAACCATAATTTTATTAATC
ATCATCTGGAGGATTATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFEAKNEKIEMPKGALISLEAQV
LHRLDALENSVIRLSLSKK

Sequences:

>Translated_99_residues
MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFEAKNEKIEMPKGALISLEAQV
LHRLDALENSVIRLSLSKK
>Mature_99_residues
MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFEAKNEKIEMPKGALISLEAQV
LHRLDALENSVIRLSLSKK

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11087; Mature: 11087

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFE
CCHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECEEEEE
AKNEKIEMPKGALISLEAQVLHRLDALENSVIRLSLSKK
ECCCEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MKMVHFLEGVHFEKLHIEALSENSSNKEMRICMPKGAIIDKHKAPGAISVQVLEGKILFE
CCHHHHHCCCCEEEEEEEEECCCCCCCEEEEEECCCCEEECCCCCCEEEEEEEECEEEEE
AKNEKIEMPKGALISLEAQVLHRLDALENSVIRLSLSKK
ECCCEEECCCCCEEEEHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA