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The map label for this gene is yebA [C]

Identifier: 188527657

GI number: 188527657

Start: 858740

End: 859948

Strand: Reverse

Name: yebA [C]

Synonym: HPSH_04395

Alternate gene names: 188527657

Gene position: 859948-858740 (Counterclockwise)

Preceding gene: 188527659

Following gene: 188527656

Centisome position: 53.46

GC content: 39.21

Gene sequence:

>1209_bases
ATGGTATTTTTTCATAAGAAAATTATTTTAAATTTTATCTATTCTTTAATGGTTGCTTTTTTATCCCATGGGGTGTTTTT
AAAAGCCGATGAGGTGAAAAAGCAAACTCTTTTAGTGGGTGAAAGGCTTGTGTGGGATAAGCTCACGCTGTTAGGGTTTT
TAGAAAAAAACCATATCCCTCAAAAACTCTACTACAACCTAAGCTCTCAAGATAAAGAATTGAGCGCTGAAATTCAAAGC
AATGTTACCTACTACACCTTAAGAGATGAAAACAACACGCTCATTCAAGCCCTTATCCCTATAAGCCAGGATTTGCAAAT
CCATATTTACAAAAAAGGGGAGGATTATTTTTTAGACTTTATCCCCATTATATTCACTCGTAAAGAAAAAACCCTCCTTC
TTTCTTTACAAACTTCGCCCTATCAAGATATTGTCAAAGCCACCAATGATCCCCTTTTAGCCAACCAATTGATGAACGCG
TATAAAAAAAGCGTGCCTTTTAAACGCCTAGCAAAAAACGATAAAATCGCTATCGTTTATACAAGAGATTATCGTGTGGG
GCAAGCGTTTGGCCAGCCGACTATCAAAATGGCAATGGTTAGCTCTCGTTCTAACCAATACTATCTTTTTTCCCATTCAA
ACGGGCGTTATTATGACTCAAAGGCGCAAGAAGTGGCAGGGTTTTTATTAGAAACCCCGGTGAAATACACCCGCATTTCT
TCGCCTTTTTCGTATGGGAGGTACCACCCTATTTTAAAAGTCAGACGGCCTCATTACGGCGTGGATTATGTGGCTAAACA
TGGCAGTTTGATCCATTCTGCTTCAGACGGGCGTGTGGGTTTTATAGGGATTAAGGTGGGGTATGGGAATGTGGTTGAAA
TCCATTTGAACGAATTGCGCTTGGTGTATGCTCACATGAGCGCGTTTGCTAAGGGGTTAAAAAAAGGATCATTCGTTAAA
AAAGGGCAAATCATAGGAAGAGTGGGAAGCACCGGTTTAAGCACCGGGCCGCATTTGCATTTTGGCGTGTATAAAAACTC
CCGCCCCATCAATCCTTTAGGCTATATCCGCACCGCTAAAAGCAAATTACACGGCAAGCAAAGAGAGGTTTTTTTAGAAA
AAGCTCAGCATTCTAAGCAAAAATTAGAAGAACTTCTTAAAACCCATTCTTTTGAAAAAAATTCATTTTATCTTTTAGAG
GGTTTTTAA

Upstream 100 bases:

>100_bases
TATAAAAACAAGGCTAGGCTTTAAACTTGTATCGTTTTTCTTTAACGGCTTATGTTATACTAATAAAATACAGATTCAAT
TGAAGGCATTAAACAACTGC

Downstream 100 bases:

>100_bases
TGTCTTATTTTAAGAATGCTTTCAATCAAAAATCTTTAATAGATGATTCTAGTGTGTATTTAGAGTCTTGTTCTAGCTCT
AATTTCATAGAATTAAAACG

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MVFFHKKIILNFIYSLMVAFLSHGVFLKADEVKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQS
NVTYYTLRDENNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIVKATNDPLLANQLMNA
YKKSVPFKRLAKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRIS
SPFSYGRYHPILKVRRPHYGVDYVAKHGSLIHSASDGRVGFIGIKVGYGNVVEIHLNELRLVYAHMSAFAKGLKKGSFVK
KGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQHSKQKLEELLKTHSFEKNSFYLLE
GF

Sequences:

>Translated_402_residues
MVFFHKKIILNFIYSLMVAFLSHGVFLKADEVKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQS
NVTYYTLRDENNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIVKATNDPLLANQLMNA
YKKSVPFKRLAKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRIS
SPFSYGRYHPILKVRRPHYGVDYVAKHGSLIHSASDGRVGFIGIKVGYGNVVEIHLNELRLVYAHMSAFAKGLKKGSFVK
KGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQHSKQKLEELLKTHSFEKNSFYLLE
GF
>Mature_402_residues
MVFFHKKIILNFIYSLMVAFLSHGVFLKADEVKKQTLLVGERLVWDKLTLLGFLEKNHIPQKLYYNLSSQDKELSAEIQS
NVTYYTLRDENNTLIQALIPISQDLQIHIYKKGEDYFLDFIPIIFTRKEKTLLLSLQTSPYQDIVKATNDPLLANQLMNA
YKKSVPFKRLAKNDKIAIVYTRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRIS
SPFSYGRYHPILKVRRPHYGVDYVAKHGSLIHSASDGRVGFIGIKVGYGNVVEIHLNELRLVYAHMSAFAKGLKKGSFVK
KGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAKSKLHGKQREVFLEKAQHSKQKLEELLKTHSFEKNSFYLLE
GF

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=223, Percent_Identity=31.390134529148, Blast_Score=98, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 46073; Mature: 46073

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFHKKIILNFIYSLMVAFLSHGVFLKADEVKKQTLLVGERLVWDKLTLLGFLEKNHIP
CEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
QKLYYNLSSQDKELSAEIQSNVTYYTLRDENNTLIQALIPISQDLQIHIYKKGEDYFLDF
HHEEECCCCCCHHHHHHHHCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCEEEEE
IPIIFTRKEKTLLLSLQTSPYQDIVKATNDPLLANQLMNAYKKSVPFKRLAKNDKIAIVY
EEEEEECCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEE
TRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRIS
ECCCEEHHHCCCCCEEEEEEECCCCEEEEEECCCCCEECCHHHHHHHHHHHCCCHHEEEC
SPFSYGRYHPILKVRRPHYGVDYVAKHGSLIHSASDGRVGFIGIKVGYGNVVEIHLNELR
CCCCCCCCCCEEEECCCCCCHHHHHHCCCEEECCCCCEEEEEEEEECCCCEEEEEECHHH
LVYAHMSAFAKGLKKGSFVKKGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAK
HHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
SKLHGKQREVFLEKAQHSKQKLEELLKTHSFEKNSFYLLEGF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
>Mature Secondary Structure
MVFFHKKIILNFIYSLMVAFLSHGVFLKADEVKKQTLLVGERLVWDKLTLLGFLEKNHIP
CEEEHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
QKLYYNLSSQDKELSAEIQSNVTYYTLRDENNTLIQALIPISQDLQIHIYKKGEDYFLDF
HHEEECCCCCCHHHHHHHHCCEEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCEEEEE
IPIIFTRKEKTLLLSLQTSPYQDIVKATNDPLLANQLMNAYKKSVPFKRLAKNDKIAIVY
EEEEEECCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCEEEEE
TRDYRVGQAFGQPTIKMAMVSSRSNQYYLFSHSNGRYYDSKAQEVAGFLLETPVKYTRIS
ECCCEEHHHCCCCCEEEEEEECCCCEEEEEECCCCCEECCHHHHHHHHHHHCCCHHEEEC
SPFSYGRYHPILKVRRPHYGVDYVAKHGSLIHSASDGRVGFIGIKVGYGNVVEIHLNELR
CCCCCCCCCCEEEECCCCCCHHHHHHCCCEEECCCCCEEEEEEEEECCCCEEEEEECHHH
LVYAHMSAFAKGLKKGSFVKKGQIIGRVGSTGLSTGPHLHFGVYKNSRPINPLGYIRTAK
HHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHH
SKLHGKQREVFLEKAQHSKQKLEELLKTHSFEKNSFYLLEGF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]